Brachybacterium avium: CFK39_15180
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Entry
CFK39_15180 CDS
T04950
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
brv
Brachybacterium avium
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brv03032
]
CFK39_15180
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_15180
Enzymes [BR:
brv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFK39_15180
DNA replication proteins [BR:
brv03032
]
Prokaryotic type
DNA Topoisomerases
CFK39_15180
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFK39_15180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
Motif
Other DBs
NCBI-ProteinID:
ASK66926
UniProt:
A0A220UG99
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Position
complement(3388231..3390699)
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AA seq
822 aa
AA seq
DB search
MMACMARSRSTTPPSGEEAVEETIVDIDVTSEMETSFLEYAYSVIYSRALPDARDGLKPV
QRRILFMMAEMGLRPEKGHVKSQRVVGEVMGKLHPHGDTAIYDALVRMAQSFNMRMPLVD
GHGNFGSLDNGPAAPRYTEARLAKAALLMTDSLDEDVVDMIPNYDNQLLQPEVLPAQYPN
LLVNGASGIAVGMATNMAPHNLVETIAAARHLIDHPDAELEELMRFVPGPDLPTGGRIVG
LDGIRDAYRTGRGSFKMRATTRIENVTSRRKGIVVTELPYQVGPERLAEKLRDAVQAKRV
QGITDYQDFTDRHHGLRLVLTVKSGFDPDAVLAQLYKYTPLEESFGINNVALVEGQPRTL
GLKQMLEVFVEHRVTVVRRRTEHRLSRRRARLHLVEGLLLAILDIDEVIQIVRQSDDAET
ARTRLMTVFDLSELQAEYILELRLRRLTKFSQIDLEAERDDLRREIERLEEILGSEVVLR
ALVSEELAAVAAEHGDSRRTVLLEAAEKPAVVSGASLEVADEPCRVLLTGTGLIARITGG
DPLLREGPRGAHDVIVSDARTTTRSSVGVVTDRGRVLRLSVVDLPSLAPTAGAPSLAGGT
RLSDLIDLEREERALGLIRVAEPDIARGGAIAVGTRQGVVKRVQLDFPRGDGFEIISLKD
GDAVVGVVDLEQDEDLDLVFVTAEAQLLHFPASGIRPQGRTAGGVAGVKLASGDRVVSFG
AIDVTAPADVVTVAGSSGTLPLLQTGSLKVSALTEFPAKGRATAGMRCHRFLRGEDALIG
AWVVPHPARASSEAGQPIDLPEPTGRRDGSGTPVAVPIAAVG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtgcatggcccgatcacgcagcaccaccccgccctccggagaggaagccgtc
gaggagaccatcgtcgacatcgacgtcaccagtgagatggagacgtcgttcctggagtac
gcgtattccgtgatctactcccgggcgctcccggatgcccgcgacgggctcaagcccgtc
cagcggcgcatcctcttcatgatggccgagatggggctgcgtcccgagaagggccatgtg
aagagccagcgcgtggtcggcgaggtgatgggcaagctccatccccacggcgatacggcg
atctacgacgcgctggtgcgcatggcgcagagcttcaacatgcgcatgccactggtggac
ggccacggcaacttcggctcgctggacaacggccccgccgcgccgcgctacaccgaggcg
cggctggcgaaggccgcgctgctgatgacggactcgctggacgaggacgtcgtggacatg
atccccaactacgacaaccagctgctgcagcccgaggtgcttcccgctcagtatccgaat
ctgctggtcaacggggcctccggaatcgcggtcggcatggccacgaacatggcgccgcac
aacctcgtggagaccatcgccgcggcgcggcacctgatcgaccatcccgacgcggagctc
gaggagctgatgcgcttcgtcccgggaccggacctgcccaccggcggacggatcgtgggt
ctggacggcatccgggacgcgtaccgcaccgggcgcggctcgttcaagatgcgggccacc
acccggatcgagaacgtcacctcgcgtcgcaagggcatcgtggtcaccgagctgccgtac
caggtgggcccggagcgactggccgagaagctgcgcgacgccgtgcaggccaagcgggtc
cagggcatcaccgactaccaggacttcaccgaccgccaccacggcctgcgcctggtgctc
acggtcaagtcgggcttcgaccccgacgcggtgctggcgcagctgtacaagtacacgccg
ctggaggaatcgttcggcatcaacaacgtggccctggtcgaggggcagccgcgcaccctg
gggctcaagcagatgctggaggtgttcgtcgagcatcgggtgacggtggtccgccgccgc
accgagcaccggctgagcaggcgcagggcgcgcctccacctggtggaggggctgctgctg
gcgatcctggacatcgacgaggtgatccagatcgtgcgtcagagcgacgatgccgagacc
gcgcgcacgcgcctgatgaccgtcttcgacctctccgagctccaggccgagtacatcctc
gagctgaggctgcggcggctgacgaagttctcgcagatcgatctggaggccgagcgggat
gatctgcgccgggagatcgagcgtctcgaggagatcctggggtccgaggtcgtgctgcgc
gcgctggtctccgaggagctcgccgccgtggccgccgagcacggcgattctcgccgcacc
gtgctgctggaggccgcggagaagcccgccgtggtctccggggcgtccctcgaggtggcc
gatgagccgtgccgggtgctgctgaccgggaccgggctgatcgcccggatcaccgggggg
gacccgctgctgcgcgagggaccgcgcggtgcgcacgacgtgatcgtctccgatgcccgc
accaccacccgctcgagcgtcggcgtggtcaccgatcgtgggcgggtgctgcggctgtcc
gtcgtggacctgccctcgctcgccccgacggccggtgcgccgtcgctggccggaggcacg
cggctctccgacctgatcgatctggagcgcgaggagcgggccctgggcctgatccgggtg
gccgagcccgatatcgcgcggggcggggcgatcgccgtgggcacccgccagggtgtggtc
aaacgggtccagctcgacttcccccgcggggacggcttcgagatcatctcgctcaaagac
ggggacgcggtggtcggggtcgtggatctcgagcaggacgaggacctcgacctggtgttc
gtcaccgccgaggcgcagctgctccacttccccgcctccggcatccggccgcagggccgc
accgccggcggggtggccggggtcaagctcgcgagcggcgaccgggtggtgtccttcgga
gcgatcgacgtgacggctccggccgacgtggtcaccgtcgccggcagctcaggcaccctg
ccgctgctgcagaccggctcgctgaaggtctccgcgctcaccgagttccccgccaagggc
cgtgccacggccggaatgcgctgccatcgcttcctgcgcggtgaggacgcgctgatcggt
gcctgggtggtgccgcacccggcacgagcctcgtccgaggccgggcagccgatcgatctg
ccggagccgacgggacgccgggacggttcgggcaccccggtggccgtccccatcgccgcc
gtcggctga
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