Brevibacillus sp. 7WMA2: GOP56_02180
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Entry
GOP56_02180 CDS
T06452
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOP56_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brw03019
]
GOP56_02180
03400 DNA repair and recombination proteins [BR:
brw03400
]
GOP56_02180
Enzymes [BR:
brw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GOP56_02180
Messenger RNA biogenesis [BR:
brw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GOP56_02180
DNA repair and recombination proteins [BR:
brw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GOP56_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
SKI
Ins134_P3_kin_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QIC04509
UniProt:
A0AAE7BSI0
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All DBs
Position
519355..520977
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AA seq
540 aa
AA seq
DB search
METNMKNIRLILQRYFGHAAFRTGQEEIISRILKGENVLGIMSTGGGKSLTYQVPAYVLP
GITLVVSPLISLMVDQVQQLLKNGHRLATYINSSLDRDEIRLVIDELEAGKYKLVYISPE
KLQQPSIIRLLQKRGVSLVAIDEAHCISQWGHDFRTDYLKLPSLIKALGEPPVLAVTATA
THNVAQEIADLFDIAVDNQIRLSVNRSNIAYDLYPASDEADKNTRLLAQLRECQKPGIVY
CSTRQAVEQLVVLCQQGGIQRVSGFHGGMNPMERILIQEQFIANQLDVIIATNAFGMGID
KPDIRFVIHYHLPASIEAYTQEVGRIGRDQQPGYACLYVQEEDVHIHHRLFQNEYPTDEE
LVAFLGLLRTSVYRADSHVLTREGYEQKITHEELFAAIGIGENVTRLLFYYAQEAGAVHS
VQLGKNGYTYWIQPHDPKLIHGTMKQRIQLVKRSKFAKLGTMQEWIQTSGCLREALLAYF
GERMIDKPESCCRTCGINRELYHESAKQERITREAVWNLPEALERLLPRKSPNEGGSASL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatatgaaaaacattcgtcttatcttacaacggtactttggtcatgccgcg
tttcgcactggacaagaggagattattagtcgaatcttaaaaggggaaaatgtgcttggt
atcatgtctacaggtggtgggaaatcacttacgtatcaggtgccggcatatgtgctacct
ggtatcacacttgtagtatccccgctaatttccttaatggtcgatcaggttcagcagttg
ttaaaaaacggacatcggctagcgacctacataaatagttccttggatcgtgatgaaatt
cgcttggtcatagatgagctggaagcggggaaatacaaacttgtctatatttccccagaa
aaattgcaacaaccttctattatccggctcctccaaaaaagaggtgtgtccttggtagcg
attgacgaggctcattgcatatcgcagtggggccatgactttcgtacagattatttaaaa
ttgccgtctttgattaaagcactgggagaacctcctgtgctagctgtgacggccactgct
acacataacgtggcgcaagaaattgctgatctgtttgacattgctgtagataatcaaatc
cgcttaagtgtgaatcgttctaacattgcctatgatctatatccggccagcgatgaggca
gacaaaaacacacgattgcttgctcaattacgtgagtgccaaaagccgggcatcgtatac
tgcagtacaaggcaagcagtagaacaactcgtagtgctgtgccagcaaggcgggattcag
cgggtaagcggctttcatggtggaatgaacccgatggagcggattttgattcaagagcaa
tttattgcaaatcaattagacgtgattattgctacgaacgcttttggaatgggaattgat
aagccagatatccgctttgttattcactatcatcttcctgcaagcatagaagcttataca
caagaggttggacggattggacgtgaccaacaacctggatatgcttgtttgtatgtacag
gaagaggatgtgcatattcaccaccgtcttttccaaaacgaatatccaacagacgaagaa
ttagttgcctttctaggactgctacgtacctcagtttaccgagctgattcccacgttctc
accagagaggggtatgagcaaaaaatcacacatgaggaactttttgcagctattggcatt
ggcgagaatgtaacaaggctcttattttactatgcacaggaagcaggagcggttcatagt
gttcaactaggaaaaaacgggtatacctactggattcaaccacatgaccccaagctcatc
catggtacgatgaagcaacgaatacagctagtaaagcgttctaaatttgcgaaattaggg
actatgcaggagtggattcagacctctggttgtttgcgcgaagcgttgctagcttatttt
ggggagaggatgatagacaaaccagagtcatgctgtagaacctgcggaatcaacagagag
ctttatcatgagtctgcaaagcaggaacggattactcgtgaagcagtctggaatcttccg
gaagccctggaacgattgttgccccgtaaatcgccaaacgaaggaggttccgcttcgttg
tga
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