Brevibacillus sp. 7WMA2: GOP56_08200
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Entry
GOP56_08200 CDS
T06452
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOP56_08200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brw03019
]
GOP56_08200
03009 Ribosome biogenesis [BR:
brw03009
]
GOP56_08200
Enzymes [BR:
brw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GOP56_08200
Messenger RNA biogenesis [BR:
brw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GOP56_08200
Ribosome biogenesis [BR:
brw03009
]
Prokaryotic type
rRNA helicases
GOP56_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
UTP25_NTPase-like
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIC05575
UniProt:
A0AAE6WP54
LinkDB
All DBs
Position
complement(2126729..2128318)
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AA seq
529 aa
AA seq
DB search
MTIFSDLALHKNVLQAIHDMGFEEPSPIQAACIPKILEGGDLIGQAQTGTGKTAAFGIPL
AEVLNPTNNRIQAIVLTPTRELAIQVAGELVRICKYKKIRTLPIYGGQSISHQIRALRQG
VHVVIGTPGRVLDHLRRKTLQLENVKMLVLDEADEMLDMGFIEDIETILSHMKAERQTLL
FSATMPPEIKRLAHRYMKNPETVAVSREEVTAPSIEQVYYKVFERNKRESLCRILDSQDV
ELGIIFCRTKRGVDELSEALQARGYMADGLHGDLSQAQRDKVMKAFREGTIEFLIATDVA
ARGIDVGNVSHVINYDIPQDPESYVHRIGRTGRAGRKGIAMTLVTPREMRQLMVIQKQTK
ASLITRTVPTLEEIAERKRTQLREQLRSLIESESVNGMYQEIVNELMQEHDPAKVAAAAL
HLAFHTDPSGNDEEEGYNFGETGAARGMVRFFLNVGRNVNMKPQDLVREISESVGIPGKS
VGRIDIFENFTFVEVPEDVAPFVYEALRQTRINGKRINLEPAKPRTRKS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacgattttttcagatttagctttacataaaaatgtgttgcaagctattcatgatatg
ggctttgaagaaccatcaccaattcaggcggcttgcattcctaaaatactagagggtggc
gacctgatcggacaggctcaaacaggtacagggaaaacggctgcgtttggtatcccgttg
gctgaggtcttaaaccctactaacaaccgtatacaggcgattgttttgactccgactcgc
gagctcgctatacaggtggcgggagaattagtgagaatatgcaaatacaaaaaaattcgc
acactccctatctacggtgggcaatcaattagccatcagattcgtgcgcttcgacaaggt
gtgcatgtggtgattggtacacctgggcgtgttttggaccatttgcgccgcaagacactc
cagttggaaaatgtgaaaatgcttgttctcgatgaagcagatgaaatgctggacatgggc
tttattgaagatatcgagaccattcttagccacatgaaagctgagcgtcaaaccttgctt
ttctcagcaaccatgcctcctgaaatcaagcgtttagctcatcgctatatgaaaaatccc
gagactgtggctgtcagccgtgaagaagtaacagcaccttctattgaacaagtgtattat
aaagttttcgaacgtaataaacgggagagcctatgccgcattctcgatagccaggatgta
gagcttggcattattttctgtcgaacgaagcgcggagtagacgaattgagtgaggcctta
caagcacgaggctatatggcagatggcttgcatggcgacttatctcaagcacagcgcgac
aaagtaatgaaggccttccgggaaggtacgattgagtttttgattgctacagatgtagca
gctcgtgggattgatgtaggtaacgtctcacatgttattaattacgatattccacaggac
ccagaaagctacgtacatcggatcggccgaactggacgtgctgggcgtaaagggatagct
atgacactagtcactcctcgagagatgcgtcagttaatggtgattcaaaaacagacgaaa
gcatccttgattactcgcaccgtgcctaccttggaggagattgcggagcgcaaacgtact
caattacgtgaacagctacgttcgctgattgaaagtgagtctgtgaatggtatgtatcaa
gaaatcgtgaatgagctaatgcaggagcatgacccagctaaagttgcagccgctgctcta
catctcgcgtttcatactgatccgagtggaaatgatgaagaagaagggtacaattttggt
gagacgggcgcagcaagaggaatggttcgtttcttcttaaatgtaggacgaaatgtgaac
atgaagcctcaggatcttgtacgggagatttccgaatcggtgggcattccgggcaaatca
gtaggacgaattgatatttttgaaaacttcacgtttgtagaagtcccagaagatgttgct
ccgtttgtttatgaggcgttaagacagacgcgcatcaacggtaaacgtattaatctagag
cctgctaaaccgcggacacgtaaatcataa
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