Brevibacillus sp. 7WMA2: GOP56_16770
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Entry
GOP56_16770 CDS
T06452
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GOP56_16770 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brw03021
]
GOP56_16770 (rpoC)
03400 DNA repair and recombination proteins [BR:
brw03400
]
GOP56_16770 (rpoC)
Enzymes [BR:
brw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GOP56_16770 (rpoC)
Transcription machinery [BR:
brw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GOP56_16770 (rpoC)
DNA repair and recombination proteins [BR:
brw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GOP56_16770 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QIC07111
UniProt:
A0AAE6WMV1
LinkDB
All DBs
Position
3961341..3964958
Genome browser
AA seq
1205 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVVDAGDTPLDKKQLLSEKEYRNYREKYGQSFQAAMGAEAIRRLLA
EIDLEKEVSTLKEDLKTVQGQRRTRAIKRLEVLEAFRNSGNRPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLRMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERIQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGSYYLTLERKGDVGEGSIFRDPADAIAAYENAYITLQTRILIP
ASSLSKTSFTEKQQDALLATTVGKVIFNEIFPPELPYINAPTRDNLQNQVSDEYFMFEKG
QDTTAFIKSLKDPGAVKKGFLGTIIAECFRRFGTTMTSEILDKIKELAFKYSTKAGITIA
VADIVVPSEKQSILSSADEKVNAVMTQFRRGLITEDERYDRVISIWSKAKDEVTDVLMKS
MDQFNAIYMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGIRVSAIKDGKEEIEKL
SDRLEGRTCFETVRHPETGEILVHRNEEITEEMAELIVKLGIQDVYIRNVLACRTSHGVC
KRCYGRNLATGAEVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAVITEIDSEVVSIREDKDKRIIEVRGEAENKEYAAPYGARIKVSVGQKLNA
GDELTEGSVDPKEMLKVRGQRGVSNYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKLRV
IDSGETDLLPGSFVEVHEFEQANAKVLMSGKSPAVGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNSRLLNREQAEGNSDVLET
VSVES
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacgtcaataattttgaatatatgaagattggtttagcttctcccgataagatc
cgttcgtggtctttcggggaagttaaaaaacctgaaacaattaactaccgtaccctgaag
cctgagaaggatggtttgttctgtgagcgtattttcggaccaaccaaggattgggaatgt
cattgcggtaaatacaagcgcgttcgttataaaggtgtagtctgtgatcgatgcggcgtt
gaggtaactcgtgcaaaagtgcgtcgtgaacgtatgggacacattgagcttgctgctcct
gtttcccacatctggtatttcaaaggtatcccaagccgtatgggtctggtactggatatg
tctccacgttcccttgaggaagttatctacttcgcttcttatgtagtagtagatgccggg
gatactcctttggacaaaaaacaacttttgtctgaaaaagaataccgtaactatcgcgag
aaatatggtcaatccttccaagcagcaatgggtgctgaagcaattcgccgtttgctagct
gaaattgatcttgaaaaagaagtaagcacattgaaggaagatttaaaaaccgtacagggt
caacgccgtactcgtgcgattaaacgtctagaggtgctggaagcattccgtaactctggt
aatcgccctgattggatggtacttgacgtattgcctgtaattcctccagaattgcgcccg
atggtacagttggatggtggacgttttgcgacatctgacctaaatgacttgtatcgtcgt
gtgatcaaccgtaacaaccgtctaaaacgcctgcttgaacttggcgcgccagacattatc
gtacaaaacgaaaaacgtatgctacaagaagcagtggatgcgttgattgataacggtcgt
cgcggacgtcctgttactggtcctggtaaccgtccattgaaatccttgagtcatatgctt
aaaggtaagcaaggtcgtttccgtcaaaaccttttgggtaaacgtgttgactactctggt
cgttccgttatcgtagtaggaccgaaccttcgcatgtaccaatgcggtctgcctaaggaa
atggcgttggaactgttcaagcctttcgtaatgaaggagcttgtagcaaaaggcctagct
cataacattaagagtgcgaaacgtaaagttgagcgtatacaacctgaggtatgggacgta
ttggaagaggtaatcaaggaacatcctgtattactaaaccgcgctcctaccttgcaccgt
ttgggtattcaagcatttgagccagtattggttgagggacgtgcgattcgtctacatccg
ctcgtatgtacagcttataacgctgactttgacggtgaccaaatggcggttcacgtaccg
ttgtctgcggaagcacaagctgaagctcgtatcctaatgcttgctgctcaaaacatcttg
aacccgaaagatggtaaaccagttgttacaccttctcaggatatggtgcttggttcttac
tatctgacgctggagcgtaaaggagatgtgggtgaaggttctatcttccgtgaccctgct
gatgcgattgcagcttatgagaatgcatatatcacgctgcaaacacgtatccttattccg
gctagtagcttgagcaaaacttcatttacagaaaaacaacaggatgcattgctagcaact
actgtaggtaaagtaatctttaatgaaattttccctccagagctgccatacatcaatgct
cctacaagagacaaccttcagaaccaagtttctgatgagtactttatgtttgaaaaaggt
caggataccacagcttttattaagagtttgaaggatccgggtgctgttaaaaaaggcttc
ttgggaacaatcattgctgaatgcttccgtcgctttggaacaaccatgacctctgaaatt
cttgataaaataaaagaattggcatttaaatactcaacaaaagctggtattacgattgcc
gttgccgatatcgtagttccatctgaaaaacaatccattcttagcagtgctgatgagaaa
gtaaatgcggtaatgacgcaattccgtcgcggtttaattactgaagacgaacgttatgac
cgtgttatctccatctggtcaaaagctaaagatgaagtaactgacgttctcatgaaatcc
atggatcaattcaatgcgatttacatgatggctaactccggagcccgcggtaacgtgtcc
cagattactcagctagctggtatgcgtggtctgatggcaaacccgtcaggtcgaatcatc
gagttaccgatcaaatccaacttccgtgaaggtttaacggtattggaatacttcatctct
acgcatggtgcgcgtaaaggtttggccgatacagccctgcgtactgctgactcaggttac
ttaactcgtcgtctggtagacgtagcgcaagacgttatcgttcgtgaagaagattgcgga
acagataaaggtattcgcgtaagtgctattaaagatggtaaagaagaaatcgaaaagctg
tctgaccgattagaaggtcgtacctgctttgaaactgttcgtcatcctgaaacaggtgag
atccttgttcatcgtaatgaggaaattactgaggagatggctgaattaatcgttaagctt
ggcattcaagacgtatacattcgtaacgtacttgcttgccgcacaagtcacggggtctgc
aaacgttgctatggccgtaacctagcaacaggagcagaggtagaaatcggtgaagcagta
ggtattattgctgcacaatctatcggtgaaccaggtactcagttaacaatgcgtacgttc
cataccggtggggtagcaggggacgatatcacgcaaggtttgccgcgtatccaagagttg
tttgaagctcgtaacccgaaaggtcaagcggttattaccgaaatcgactcagaagtggtt
agcatccgtgaagataaagataaacgcatcatcgaggttcgcggtgaagcagaaaacaaa
gaatacgcagcgccatacggtgcacgtatcaaggtatctgttggccaaaaacttaatgcc
ggtgatgagttaacagagggttctgtagacccgaaagaaatgctgaaagtacgcggtcag
cgcggtgtatccaactacatcctgcaagaggttcagaaagtttaccgtatgcaaggggta
gaaatcaacgacaagcacgttgaggtaatgattcgtcagatgcttcgcaagttgcgcgtc
attgatagtggagaaactgatctgttgccaggttccttcgtagaggttcatgaatttgag
caagccaatgcgaaagtgcttatgtctggtaagagcccagcagttggacgtccagtgttg
cttggtatcacaaaagcttccttggagacagattccttcttgtctgcagcatccttccaa
gaaacaacacgtgttcttacagatgcagcgattaagggtaaagtagataagctacttgga
ttgaaagagaacgtaattattggtaagctgatcccagctggtaccggtatgaaccgttat
cgcaactcaagactcttaaaccgcgaacaagcagaaggtaactctgacgtactagaaaca
gtatcagtagaatcttag
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