Brevibacillus sp. 7WMA2: GOP56_17980
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Entry
GOP56_17980 CDS
T06452
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOP56_17980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brw03019
]
GOP56_17980
Messenger RNA biogenesis [BR:
brw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GOP56_17980
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QIC07311
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Position
4202659..4204311
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AA seq
550 aa
AA seq
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MSEVKIFGLGGLGEIGKNMYCVEYEDEIIIIDCGVKFPETEMFGIDLVIPDVSYLIENQH
KIKAMVLTHGHEDHIGAIPYVLKQIQTTIYGGRLTLGLVKAKLEEHRMQNDVKMVPVFED
TILSFENLSVSFFRTNHSIPDSFGIAIETPEGTVVHTGDFKFDLTPVGRPTEFGKIARIG
KNGVLALMSDSTNSERPGFTMSERTVGDSIMDVVSKARGRIILATFASNVHRLQQVVDAA
VADDRKIAVIGRSMEKAFMIGQELGYIQIPEGCQIDIKNIDNYSDNKVLIICTGSQGEPM
AALTRIASGSHRSVQIYPDDTVIISASPIPGNTVNVSRIIDKLYRAGANVVQNTAFDIHA
SGHGSSEELRLMLSFLRPTYFIPIHGEYRMLKQHGRLAEQVGVESDNIFIIDNGDVVSCT
RESGRVTSKVTAGIVLIDGSGIGDVGNIVLRDRKHLAEDGLMVVVVSIDMKQFKLLTGPD
IVSRGFVYVRGSESLIQEATALVKQKLLEALDRKVREWSELKSQINQVLKPFIFEKTGRN
PMILTIVMEV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaggttaaaatttttggtttaggtggtctgggggaaattggtaaaaacatgtat
tgcgtagagtacgaggatgagattatcatcatcgactgtggcgtaaagtttcctgagacc
gaaatgtttgggatagatttggtgataccagatgtttcctacctaattgaaaaccagcat
aagatcaaggctatggtacttactcatggacatgaagaccatattggtgctattccctat
gtgttaaaacaaatccagacaacgatttatggcggacgcctgacacttggtttggtaaag
gctaagcttgaagagcaccgtatgcaaaatgacgtaaagatggtacctgtgtttgaggat
acgattttgtcatttgaaaatctctctgtttctttcttccgtactaatcatagtattcct
gattcgtttggtattgcgattgagacaccagaaggaacagtggttcatacaggggatttt
aaatttgacctgacaccagtaggacgtcctacagagtttggaaaaattgcccgcatcgga
aaaaatggtgtactagctttgatgtctgatagcaccaacagtgaacgtccaggctttaca
atgtcagagcgtacggttggcgatagcattatggatgtcgttagcaaggcgagaggtcgt
atcattctggcaacctttgcttctaatgtacaccgtttgcaacaagttgtagatgcagca
gtagcggatgacaggaagattgctgttatcggccgaagcatggaaaaagccttcatgatt
ggccaggagctaggctatatccaaatacctgaaggatgtcaaatcgacattaaaaacatt
gataattactctgataacaaggtattaattatttgtacaggtagtcagggagaaccgatg
gcagcgctaacgcgtattgcgtctggttcacaccgttccgttcagatctatccagacgat
acagtcattatctctgcatcgccgattccaggaaatacagttaatgtaagtcgcattatt
gataagctataccgtgctggagctaacgtagtacaaaacacagcgtttgatattcatgct
tccggtcatggcagtagtgaagaattgcgtcttatgctgagttttttgcgtcctacctac
tttattccaatccatggagagtatcggatgttaaaacagcacggtagattagctgaacaa
gtgggtgtagagtctgataacatctttattattgataatggcgatgtagtttcttgtacc
agagaatcagggcgtgtgacaagcaaggtgacagcaggtatcgtgcttattgatggcagc
ggtattggtgatgttggcaatatcgtattgcgcgatcgtaaacatcttgccgaggatgga
ttaatggttgttgtcgttagcatcgatatgaaacaatttaagcttctaactggtccagat
atcgtaagtcgtggttttgtctatgtgaggggttccgaatcgctgatccaggaagctact
gctttagtcaaacagaagctattggaagcattagatcgtaaagtcagagagtggtctgaa
ttgaaatctcagattaaccaggtattaaagccgttcatctttgaaaaaacgggacgcaac
ccgatgattcttaccattgtaatggaagtgtaa
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