Brachybacterium sp. P6-10-X1: BH708_01320
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Entry
BH708_01320 CDS
T04713
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
brx
Brachybacterium sp. P6-10-X1
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brx03016
]
BH708_01320
Enzymes [BR:
brx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BH708_01320
Transfer RNA biogenesis [BR:
brx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BH708_01320
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Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
APX31582
UniProt:
A0A1P8NB70
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Position
complement(299274..300470)
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AA seq
398 aa
AA seq
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MTEPAPVTDLTAPRDGLVPVIDRIQPLLAWCEAASTAPQEPVAVDAERASSYRYSSRAYL
VQLRTEAAGTALIDPLAFTLPATLLDLLAEREWVLHAAGQDLPSLAELGMGTSTLFDTEL
AARLLGMERVGLGAVVEDALGLHLAKEHSAADWSRRPLPEGWLTYAALDVEVLVEVRDVL
AERLREDGKDEWARQEFAHELLRDHGPTRSSTWRGLHGLGGLRSVKQLAAAREMWTRRDE
MAAAEDLSPHRVIKDRDLVTAAKEAPRGRDAFDRALPAKLRRKDMWWQAARSGLELPASH
LPERSERSYPPPHKLWSKKYPEVWERYQLVRAAVGQRAEDLELPAENLLQPALLRHWVWE
HEDVPTEPEIGAQLAELGARPWQVEQAAPVIHRAQTEV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagcccgcccccgtcaccgacctgaccgctcctcgcgacggcctcgtcccggtc
atcgatcggatccagcccctgctcgcctggtgcgaggccgcctcgaccgcaccgcaggag
cccgtcgcggtcgacgccgagcgcgcctcgagctaccgctacagctcccgcgcctacctg
gtgcagctgcgcaccgaggccgcgggcaccgctctgatcgatccgctggccttcaccctg
cccgcgaccctgctggacctgctggccgagcgggaatgggtgctgcacgccgccgggcag
gatctgcccagcctggccgagctcggtatgggcacctcgacgctgttcgacaccgagctc
gccgcccggctgctggggatggagagggtcgggctcggcgccgtcgtcgaggacgccctc
gggctgcatctggccaaggagcattctgccgccgactggtcgcggcgcccgctgccggag
ggctggctcacctacgcggcgctcgacgtcgaggtgctggtggaggtccgcgacgtcctc
gccgagcggctgcgggaggacggcaaggacgagtgggcccgccaggagttcgcgcacgag
ctgctgcgcgaccacggcccgacccgatcctcgacctggcgcgggttgcacggcctgggc
ggtctgcgctcggtcaagcagctggccgcagctcgtgagatgtggacccggcgcgacgag
atggccgccgcggaggacctctccccgcaccgtgtgatcaaggaccgtgatctggtcacc
gcggccaaggaagccccccgcggacgggacgccttcgaccgggcgctgccggcgaagctg
cgccgcaaggacatgtggtggcaggcggcgcggtcagggctcgagctgcccgcctcccat
cttcccgagcgcagcgagcgctcctaccccccgccgcacaagctctggtccaagaagtac
ccggaggtgtgggagagataccaactggtgcgcgcggccgtcggtcagcgcgccgaggac
ctggagctgcccgcggagaacctcctgcaacccgccctgctgcggcactgggtctgggaa
cacgaggacgtgccgacggagccggagatcggcgcccagctcgccgagctgggcgctcgc
ccgtggcaggtcgagcaggccgccccagtgatccaccgggcccagaccgaggtctga
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