Brachybacterium sp. P6-10-X1: BH708_01510
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Entry
BH708_01510 CDS
T04713
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brx
Brachybacterium sp. P6-10-X1
Pathway
brx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH708_01510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brx03019
]
BH708_01510
03009 Ribosome biogenesis [BR:
brx03009
]
BH708_01510
Enzymes [BR:
brx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BH708_01510
Messenger RNA biogenesis [BR:
brx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BH708_01510
Ribosome biogenesis [BR:
brx03009
]
Prokaryotic type
rRNA helicases
BH708_01510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
RepB
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
APX31607
UniProt:
A0A1P8NBB1
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All DBs
Position
complement(339860..341668)
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AA seq
602 aa
AA seq
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MTDASPAQNPVTESESSDHETPDAPAEPGFDDIDLPAPLRRAVDELGFTTPSPIQAQAIP
PLLEGRDVIGVAQTGTGKTAAFGLPLLAAVDPELRQVQALVLAPTRELAMQVADAISSFA
TSIGGLDVLAVYGGSPYGPQERALARGAQVVVGTPGRVMDHMRRTNLRLDTIRMAVLDEA
DEMLRMGFAEDVEEILSHSPADRQVALFSATMPSAIQRVAQDHMKDPVRVSVSRQASTVK
SVHQTYAVVPFKHRTGALARVLATSEAEAAIVFVRTRAAAEEIGTALLSRGLIAASISGD
VPQKEREKIVERLRDGSLQVLVATDVAARGLDVERIGLVVNFDVPREPEAYVHRVGRTGR
AGRSGEALTFIGPHERRALKNIERVTKQTLAEAVIPSPRDVSKHRLAALLTQVPARIERG
RLELYRELISEFVSEHEIDPLELAAVLGAMSVGDDGPGTPTEDEEFTGATLTGDDRGRPE
RGPRGGGQTEHGYTSYRVGVGHTHGARPPGIVGAITGEGGLHGKDVGKIQIFPSFSLVQI
RGSLDEGQKARIGKAKVGGRALRISEDQGPRGGQGGGRRGNERPRREDGGRFDAKRKGPR
RP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcctcccctgcccagaatcccgtgacggagtccgagagctccgatcacgag
accccggacgctcccgcggaacccggcttcgacgacatcgatctgcccgcgcccctgcgc
cgcgcggtcgacgagctcggcttcaccaccccctcccccatccaggcccaggcgatcccg
ccgttgctcgagggcagggacgtcatcggggtcgcccagaccggcaccggcaagaccgcg
gccttcggcctccccctgctcgccgccgtcgaccccgagctgcgccaggtccaggccctc
gtgctcgccccgacgcgtgagctggccatgcaggtcgccgacgccatctcgtccttcgcg
acgtcgatcggcggcctcgacgtcctcgccgtgtacggcggctccccctacggtccgcag
gagcgggcgctcgcccgcggtgcccaggtcgtcgtcggaaccccgggccgcgtgatggat
cacatgcgacgcaccaatctgcgtctggacaccatccgcatggcggtcctcgacgaggcc
gacgagatgctgcgcatgggcttcgcggaggacgtcgaggagatcctctcccactcgcct
gccgaccgccaggtcgccctgttctcggcgaccatgccctcagccatccagcgcgtcgcc
caggaccacatgaaggatccggtccgcgtgagcgtgtcccggcaggcatccacggtcaag
agcgtccaccagacctacgccgtggtgcccttcaagcaccgtacgggcgcgctcgcccgg
gtgctggcgacctccgaggcggaagcggcgatcgtcttcgtgcgcacccgcgccgctgcg
gaggagatcggcaccgccctgctctcgcgcggtctgatcgctgcctccatcagcggtgac
gtgccgcagaaggagcgcgagaagatcgtcgagcggctgcgggacgggtcgctgcaggtg
ttggtggcgaccgacgtggccgcccgcggtctggacgtcgagcgcatcggcctggtcgtg
aacttcgacgtgccgcgcgagcccgaggcgtacgtccaccgcgtgggccgcaccggccgc
gccggccgctccggcgaggcgctgacgttcatcggcccgcacgagcgccgggcgctgaag
aacatcgagcgcgtcaccaagcagaccctcgccgaagcggtcatcccgtccccccgtgac
gtgtccaagcaccggctggccgcgctgctcacccaggtcccggcccggatcgagcgcgga
cgcctcgagctgtaccgcgagctgatcagcgaattcgtctccgagcacgagatcgacccg
ctcgagctcgccgcggtgctgggcgccatgtccgtcggcgacgacggccccggcaccccc
accgaggacgaggagttcaccggtgccacgctgacgggcgacgaccggggacgccccgag
cggggtccgcgcggcggcggacagaccgagcacggctacacgtcctaccgcgtcggcgtg
gggcacacccacggggctcgcccgccggggatcgtcggtgcgatcacgggcgagggcggt
ctgcacggcaaggacgtgggcaagatccagatcttccccagcttctccctggtgcagatc
cgcggttccctcgacgagggacagaaggcgcgcatcgggaaggcgaaggtcggcggtcgc
gcgctgcgcatcagcgaggaccagggccctcgcggcggccagggcggcgggcgacgtggc
aatgagcgtccgcgccgggaggacggcggccgcttcgacgcgaagcggaaggggccccgt
cgcccctga
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