Brachybacterium sp. P6-10-X1: BH708_03440
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Entry
BH708_03440 CDS
T04713
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
brx
Brachybacterium sp. P6-10-X1
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brx03019
]
BH708_03440
Enzymes [BR:
brx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BH708_03440
Messenger RNA biogenesis [BR:
brx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BH708_03440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
AAA_22
AAA_30
NOCA1_mid
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
APX31934
LinkDB
All DBs
Position
complement(774885..777755)
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AA seq
956 aa
AA seq
DB search
MSSPSERYAAWQAEKTLTASELGAFTTRYDFALDDFQLSGCRVLEDGSSVLVAAPTGAGK
TVVGEFAVHLARARGRKVFYTAPIKALSNQKFTELVDWLGHEAVGLLTGDTSIRPDADVV
VMTTEVLRNMLYADSPLLEGLGFVVMDEVHYLADRLRGPVWEEVIIHLDPSVQLVALSAT
VSNAEEFGAWLQEVRGATEIVVSETRPVPLWQHVVVGEELMDLFVDDHGEAVVSHGPGVR
GTRHVNPEIERVTSFSLPVDERSGRSRGRAPAGRKGTSGRHRPRGSGRHRPLHKRPGGDR
GAPRGGPAEGPRPPRRPELVRILDDAALLPAIMFIFSRAGCEGAVQQCARVRLRLTDEGE
RSAIRAVLDDRLAPIGIEDEEILGIAAFRRAVLDGYAAHHAGMLPLLKTVVEELFASGLL
KVVFATETLALGINMPARSVVLEKLVKFNGVDHADLTPGEYTQLTGRAGRRGIDTEGHAV
VVAGPRFDADAVGSLASRRTYPLRSAFRPTPNMTVNLLDRFDLSRARETLETSFAQFQAD
RSVVGLASRARELEDTADSYREAVTCDRGDLLEYAEIQERISEREKSLSRARAAADRDRT
RTVLGGLRRGEVIAVPGGKRRGYAVVLDVDPVVLGGPQVDLLDTEGRRRTLRPGDVPSSP
AVIDTLRLPRRDALGSSKVRKDTAAALRQSLSGRDEPRREVRARTERTPSTAASDEQLQQ
LREELRAHPCADCPELESHLRWVGRWRKARTDLEGVQRRIQGRTSSLARRFDRLADLLVE
LGYLAREDEELVPTPGGLRLRRLFSDRDLLIAQCLEHGAWTGLDAPGLAAVVSAAVHESR
RDDRAPEIIADPAVRAALEATGHLAAELQAAESRHGIDPTTPPDPAISAIVHRWARGAHL
AAALDGNDLPPGDFVRHCRQVIDLLDQLTADEELGAIAHRAVGAVRRGLVAQEIDR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgccctcggagcgctacgccgcctggcaggcggagaagaccttgaccgcctcc
gagctcggggccttcaccacccgctacgacttcgcgctggacgatttccagctgtccggc
tgccgggtcctcgaggacggaagctccgtgctggtcgccgcgccgacgggtgccggcaag
accgtcgtcggcgagttcgccgtccatctcgcccgcgcccgtggccggaaggtgttctac
accgctccgatcaaggcgctgtcgaaccagaagttcaccgagctggtggactggctcggc
catgaggcggtggggctgctgaccggcgacacctccatccggcccgacgccgacgtggtg
gtgatgaccaccgaggtgctgcgcaacatgctctatgccgactccccgctgctggagggg
ctcggcttcgtggtgatggacgaggtccactatctggccgatcgcctgcgcggcccggtg
tgggaggaggtcatcatccacctcgacccctccgtgcagctggtcgcgctctcggcgacg
gtctcgaacgcggaggagttcggcgcctggctgcaggaggtgcgcggggccaccgagatc
gtggtctccgagacccgcccggtgccgctgtggcagcacgtcgtggtcggcgaggagctc
atggacctcttcgtcgacgaccacggcgaggcggtcgtctcccacggaccgggggtccgc
ggcacgcggcacgtgaacccggagatcgagcgggtcacctcgttctccctgcccgtggac
gaacgctcggggcgcagccgcggacgagcgcccgccggccgcaaggggaccagcggtcgg
caccgcccgcgcggatccggccggcatcggccgctgcacaagcgacccgggggcgaccgc
ggggctccgcgcggagggccggccgagggcccccgccccccgcgtcgacctgagctcgtg
cggattctcgacgacgccgcgctgctgccggcgatcatgttcatcttctcccgggccggc
tgcgagggcgcggtccagcagtgcgcacgggtccgcctgcgcctgaccgacgagggcgag
cgcagcgcgatccgcgccgtcctggacgaccgtctggccccgatcgggatcgaggacgag
gagatcctcggcatcgcggcgttccgccgcgcggtgctcgacggctacgccgcccatcac
gccgggatgctcccgctgctgaagaccgtcgtcgaggagctcttcgcgagcggcctgctc
aaggtcgtcttcgccaccgagaccctggcgctcggcatcaacatgccggcgcgctcggtg
gtgctggagaagctggtcaagttcaacggggtcgaccacgccgacctcacgcccggggag
tacacgcagctcaccggccgggcggggcgtcgcggcatcgacaccgaggggcacgccgtc
gtcgtggccgggccccggttcgacgccgatgcggtcggttcgctcgcctcccgacgtacc
tacccgctgcgctccgccttccggcccaccccgaacatgaccgtgaacctgctggaccgc
ttcgacctctcccgggcgcgggagacgctggagaccagcttcgcccagttccaggcggac
cgctccgtggtgggtctcgcgagccgcgcccgagagctcgaggacaccgccgactcctac
cgcgaagccgtcacctgcgatcggggcgatctgctcgagtacgccgagatccaggagcgg
atcagcgagcgggagaagtccctgtcccgggcccgggccgccgccgatcgtgaccgcacc
cgcacggtgctcggcgggctgcgacgcggcgaggtgatcgccgtgccggggggcaagcgc
cgcggctacgcggtggtgctggacgtggaccccgtcgtgctcgggggcccgcaggtcgat
ctgctggacaccgagggccgccgacgcaccctccggcccggggacgtgccgtcctccccg
gccgtcatcgacaccttgcgcctgccccgccgggacgcgctcggcagctccaaggtgcgc
aaggacaccgcggccgcgctgcgccagagcctctccggccgtgacgaaccccggcgggag
gtgcgcgcccgcaccgagcgcaccccgtcgaccgccgcgagcgacgagcagctccagcag
ctgcgcgaggagctgcgcgcccacccctgcgccgactgcccggagctggagtcccatctg
cgctgggtgggccgctggaggaaggcgcgcacggacctcgaaggagtccagcgccgtatc
cagggacggaccagctcgctggcacggcggttcgaccgcctcgccgatctgctcgtcgag
ctcggctatctcgcccgcgaggacgaggagctggtccccacccccggcggcctgcggctg
cggcgcctgttcagcgaccgcgacctgctgatcgcgcagtgcctcgagcacggcgcctgg
acgggcctggacgcgccggggcttgccgccgtggtctccgccgccgtccacgagtcccgg
cgcgacgatcgtgcccccgagatcatcgcggacccggcggtccgtgcggcgctggaggcc
acgggtcacctggctgctgagctgcaggcggcggagtcccgccacggcatcgatcccacg
acgccgcccgacccggcgatctccgcgatcgtgcaccgctgggcccgcggcgcccatctc
gccgccgcgctggacggcaacgatctgccgcccggggacttcgtgcgccactgccgccag
gtcatcgacctgctcgaccagctcacggccgatgaggagctgggggccatcgcccaccgg
gcggtgggggcggtgcgccgcggtctcgtcgcccaggagatcgaccgatga
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