Brachybacterium sp. P6-10-X1: BH708_05125
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Entry
BH708_05125 CDS
T04713
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
brx
Brachybacterium sp. P6-10-X1
Pathway
brx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BH708_05125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brx03400
]
BH708_05125
Enzymes [BR:
brx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BH708_05125
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BH708_05125
DNA repair and recombination proteins [BR:
brx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BH708_05125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NETI
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
APX32207
UniProt:
A0A1P8ND37
LinkDB
All DBs
Position
complement(1133689..1134633)
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AA seq
314 aa
AA seq
DB search
MPELPEVEVVRRGLEPRTVGRRIESVEVLDPRILRRQSGGADRLRGALAGTRMTAVVRRG
KFLWWRLADETGEDTGEALMAHLGMSGQLRVRDAGALTAASGVAAPSEGPASDPLRHRRL
TLHLDDGTAIDLIDQRIFGGIWASPLERAADGAAAGLGSPDALLPADAARIARDLLDPAA
DLPAIARTIRSRRAGVKSLLLGQDLVSGIGNIYADEALWEARTRYDTPGAALTQRRALGI
LRAAGEVMERALAVGGTSFDALYVNVDGRSGYFALSLNVYGRAGQPCRRCESPIVREKFA
NRSSHFCPCCQRIR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtccgtcgtggcctggaaccccgcaccgtcggc
cgtcggatcgagtcggtcgaggtgctcgacccccggatcctgcgccgccagagcggggga
gcggatcgcctgcgcggcgccctggccggcacccggatgaccgccgtggtgcgccgcggg
aagttcctgtggtggcgcctggccgacgagacgggtgaggacaccggcgaggcgctgatg
gcgcatctgggcatgagcgggcagctgcgcgtgcgcgacgccggggcgctcaccgccgcc
tccggcgttgccgccccgtccgagggccccgcctcggatccgctgcgccaccgccgactg
accctccacctcgacgacggcacggcgatcgacctgatcgaccagcggatcttcggcggg
atctgggccagtcccctcgaacgcgccgccgacggcgccgccgccggactcggcagcccg
gacgcgctgctgccggccgacgccgcacggatcgcccgcgacctgctcgatcccgcggcc
gatctgcccgcgatcgcccgcacgatccgttcccgacgcgccggggtgaagtcgctgctg
ctcggccaggacctggtcagcggcatcggcaacatctacgccgacgaggcgctgtgggag
gcccgcacccgctacgacacccccggcgcggcactgacccagcgcagggcgttggggatc
ctgcgcgcggccggcgaggtgatggagcgggcgctggccgtcggcggcaccagcttcgac
gcgctgtacgtcaacgtcgacggacgcagcggctacttcgcactgagcctcaatgtctac
gggcgcgctgggcagccgtgcaggcgttgtgaatcccccatcgtgcgggagaagttcgcg
aaccgttcgagccacttttgcccgtgctgccagcggatacgctag
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