Brachybacterium sp. P6-10-X1: BH708_18160
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Entry
BH708_18160 CDS
T04713
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
brx
Brachybacterium sp. P6-10-X1
Pathway
brx03030
DNA replication
brx03430
Mismatch repair
brx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BH708_18160
03430 Mismatch repair
BH708_18160
03440 Homologous recombination
BH708_18160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brx03032
]
BH708_18160
03400 DNA repair and recombination proteins [BR:
brx03400
]
BH708_18160
Enzymes [BR:
brx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BH708_18160
DNA replication proteins [BR:
brx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BH708_18160
DNA repair and recombination proteins [BR:
brx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BH708_18160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Smr
Motif
Other DBs
NCBI-ProteinID:
APX34311
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All DBs
Position
4122903..4123619
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AA seq
238 aa
AA seq
DB search
MTISTASWIDAPLLGFDTETTGTNVATDRIVTVALVHSVGPGRENETVATWLIDPEIDIP
EPAQRVHGISTEHARVHGMKAAEALEEVVTMIADALNQDVPLVAFNGSFDLAILENELTR
LGLPTLAARLGHDIAPVIDPLVVDRGVDRYRKGKRTLTDLIAHYGCEQDGRLHTADVDVS
ATLDVLRALVLAHPKLGGSALPDLHREQIAWHRAWAENFNQFLQKKGRTPDVSTTWPL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagcaccgcttcctggatcgacgccccgctgctcggcttcgacaccgagacc
accggcacgaacgtggccaccgaccggatcgtgaccgtcgccctcgtgcactccgtcggc
ccgggccgggagaacgagaccgtcgcgacctggctgatcgaccccgagatcgacattccc
gaaccggcccagcgggtccacggcatcagcacggagcatgcgcgggtgcacggcatgaag
gcggccgaggcgctcgaggaggtcgtcaccatgatcgccgacgccctgaaccaggacgtc
ccgctggtcgccttcaacggcagcttcgacctcgccatcctcgagaacgaactgacccgg
ctgggcctgcccacgctcgccgcgcgcctcggtcatgacatcgcgcccgtgatcgacccg
ctggtggtcgaccgcggggtggaccgctaccgcaagggcaagcgcaccctcaccgatctc
atcgcccattacggctgcgagcaggacggccggctgcacacggccgacgtggacgtctcg
gccacgttggacgtgctgcgcgccctcgtgctggcccacccgaagctcggcggttcggcc
ctgccggacctgcatcgcgagcagatcgcctggcaccgcgcctgggcggagaacttcaac
cagttcctccagaagaagggcaggaccccggacgtcagcaccacctggccgctgtga
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