Brachybacterium sp. P6-10-X1: BH708_18330
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Entry
BH708_18330 CDS
T04713
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brx
Brachybacterium sp. P6-10-X1
Pathway
brx03420
Nucleotide excision repair
brx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BH708_18330
03430 Mismatch repair
BH708_18330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brx03400
]
BH708_18330
Enzymes [BR:
brx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BH708_18330
DNA repair and recombination proteins [BR:
brx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BH708_18330
MMR (mismatch excision repair)
Other MMR factors
BH708_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
ResIII
DUF2067
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APX34341
LinkDB
All DBs
Position
4158198..4161071
Genome browser
AA seq
957 aa
AA seq
DB search
MSSLFDDLSLPDAFRRLDGVTVAPSAAAPADGSTGREQAHPGPGEAPAQEEPPLAEEPPP
EDEPPFEDVSPFEDEPPSTALPAAPADDEQIPHPADRARPAGDRHDAFAVDPAVLSELTD
GLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLRAREALPGEILAITFTNKAAA
EMRERVGELVGPVARSMWVSTFHSACVRILRRDAQAAGLKSTFTIYDSADSLRLITTIAK
DLELDTKKHAPRALASRISSLKNELIDPIDFADEAESAKNPFERTLARIYTNYTERLRQA
NAVDFDDLIALTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGEDPRAD
LTVVGDSDQSIYAFRGATIRNIIEFEKDFPSARTIVLEQNYRSTQNILTAANAVIEENEG
RRKKNLWTDQGEGEQITLYVADDEQAEARYIARQIDALVDHGRSAGDIAIFYRANAQSRA
LEDQLIRVGLPYRVVGGTRFYERREIKDAMAYLRVLANPADEINLRRILNVPKRGIGDRA
EAAIAMLAERDRISFGEALRRADEAPGIATRSLNAVRTFVAMLEDLQEMASRGDGPAELV
EAILQRSGYYAELQGSEDLQDESRLENLAELISVAAEFEAETEAADAAASEFEEAEPEVG
SDSGSRSDPGAEPGTAAGPGTAAGPGTGAEGSTEGPAGSSEVIGADIDPEAALSAPDDPE
ASLVDRFLEKVSLVADADQLPGGEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTL
SDPHELQEERRLAYVGITRSRERLYLTRAQMRTTWGQSQFMPGSRFLDEIPEAVLDVARA
GSTLSGADFGGMGAGGYGSGTSGGSRSGGGRGPSFSGGIGGGRSDVKRPSFGSGRTPVSA
AAMPQLSVGDRVTHDSFGMGSVTEVSGQGEKTQVEVQFKPPNGTKRLLLRYAPLTKL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagttcactcttcgacgacctctccctgcccgatgccttccgccgcctcgacggtgtg
acggtcgccccctcggccgccgcgcccgccgacgggagcaccggccgggagcaggcgcat
ccggggccgggggaagcgcccgcccaggaggagccgcccctcgcggaggaaccgccgccg
gaggacgagcccccgttcgaggacgtgtccccgttcgaggacgagccgccgtcgaccgcg
ctccccgcagcgccggcggatgacgagcagatcccgcatccggccgaccgggcccgacct
gccggagaccgtcacgatgccttcgccgtcgaccccgccgtcctctccgagctcaccgac
gggctgaacccggcccagcgggaggccgtcgagcaccgcggcagcccgctgctgatcgtc
gccggcgccggctccggcaagactcgggtgctgacccggcgcatcgcgcatctgctccgc
gcccgggaggccctgcccggggagatcctcgcgatcaccttcaccaacaaggccgccgcc
gagatgcgcgaacgggtcggggagctggtgggaccggtcgcccgcagcatgtgggtctcc
accttccacagcgcctgcgtgaggatcctgcgccgcgacgcccaggccgccggcctcaag
agcaccttcacgatctacgacagcgccgactccctgcggttgatcaccacgatcgccaag
gacctggagctcgacaccaagaagcacgccccccgggccctggcttcgcgcatctcctcg
ctgaagaacgagctcatcgacccgatcgacttcgccgatgaggccgagagcgcgaagaac
cccttcgaacggacgctggcgcggatctacacgaactacaccgagcgcctgcgccaggcc
aatgcggtggacttcgacgacctcatcgcgttgacggtgacgctgctgcgggagaacccg
gcgatccgcgagggctaccgccgccgcttccgccacctcctggtcgacgagtaccaggac
accaacacagcgcagtatcagctggtccgtgagctggtgggggaggaccctcgcgccgat
ctcaccgtggtgggcgactccgaccagtcgatctacgcgttccgcggggccacgatccgc
aacatcatcgagttcgagaaggacttcccctcggcccgcaccatcgtgctggagcagaac
taccgctcgacccagaacatcctcacggccgccaacgcggtgatcgaggagaacgaggga
cggcgcaagaagaacctgtggaccgatcagggggagggcgagcagatcaccctgtatgtc
gccgacgacgagcaggccgaggcgcgctacatcgcccgccagatcgacgccctggtcgac
catggccgcagcgccggggacatcgcgatcttctatcgcgccaacgcgcagtcacgcgct
ctggaggaccagctgatccgggtggggctgccctaccgggtcgtcggcgggacccgcttc
tacgaacggcgcgagatcaaggacgccatggcgtacctgcgtgtcctggccaacccggcc
gacgagatcaacctgcggcggatcctcaacgtccccaagcgcggcatcggcgaccgggcg
gaggccgcgatcgcgatgctcgccgagcgggaccggatcagcttcggcgaggcgctgcgg
cgtgccgacgaggcgccggggatcgccacccgctccctgaacgcggtgcgcaccttcgtc
gcgatgctcgaggacctccaggagatggcgtcccgcggtgacgggcccgccgagctggtc
gaggcgatcctgcagcggtcgggctattacgccgagctgcagggcagcgaggacctccag
gacgagtcgcgcctggagaacctcgccgagctgatcagcgtggccgccgagttcgaggcc
gagaccgaggcggccgacgccgccgccagcgagttcgaggaggcggagccagaggtaggg
tccgactccgggtccaggtccgaccccggggccgagcccgggaccgccgcggggcccggg
acggccgcagggcccgggaccggcgcggagggctcgaccgagggaccggccggatcctcc
gaggtgatcggcgccgacatcgaccccgaggccgcgctcagcgccccggatgatcccgag
gcctccctggtggaccgcttcctggagaaggtctccctggtggccgacgccgatcagctc
cccggcggcgaggaccagttcgtcaccctgatgacactgcacacggccaagggcctggag
ttcccggtcgtgttcctcaccggcatggaggacggcacctttccccacaaccgcaccctc
tcggatccgcacgagctgcaggaggagcggcgcctggcgtacgtgggcatcacccgctcc
cgcgagcggctctacctcacccgcgctcagatgcgcaccacctggggacagtcgcagttc
atgcccggcagccgcttcctcgacgagatccccgaggccgtgctcgacgtggcgcgggcc
ggctccaccctcagcggcgcggatttcggcggcatgggcgcgggcggatacggctccggc
acctctggcggcagccgctccggcggcgggcgcggcccgtccttcagcggcgggatcggc
ggggggcgaagcgatgtgaagcggccaagcttcggatcggggcgcacgcccgtctccgcc
gcggcgatgccccagctgagcgtcggggaccgtgtcacccacgactccttcggcatgggc
tcggtcaccgaggtctccgggcaaggggagaagacccaggtcgaggtgcagttcaagccg
ccgaacgggaccaagcggctgctgctgcgctatgcgccgctgacgaagctctag
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