Bacillus rugosus: M0696_00685
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Entry
M0696_00685 CDS
T08218
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bry
Bacillus rugosus
Pathway
bry03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M0696_00685 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bry03021
]
M0696_00685 (rpoC)
03400 DNA repair and recombination proteins [BR:
bry03400
]
M0696_00685 (rpoC)
Enzymes [BR:
bry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M0696_00685 (rpoC)
Transcription machinery [BR:
bry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M0696_00685 (rpoC)
DNA repair and recombination proteins [BR:
bry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M0696_00685 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UPV79332
LinkDB
All DBs
Position
125174..128773
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIEQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAQPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTEDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtcatttactttgcttcttacgttgtaactgatccggca
aacacaccgcttgaaaagaaacagcttctgtctgagaaagaataccgtgcttatcttgat
aaatacggtaataaattccaagcgtctatgggtgcagaagcgattcataaacttctacaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctaaaaacttcacaagga
cagcgccgtactcgtgcgatcaaacgccttgaagttttagaagccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctcctgagcttagaccg
atggtacagctagatggcggacgttttgcgacttctgatttgaatgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttggaccttggtgcgcctagcatcatt
gttcaaaacgaaaagcgtatgcttcaagaggctgttgatgctttaattgataacggccgc
cgcggacgtcctgtaacaggtcctggtaacagaccgttaaaatctctttcgcacatgctg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgtcgattactccgga
cgttctgtaatcgttgttggtcctcatttgaaaatgtaccaatgcggattgccgaaggaa
atggcgcttgaacttttcaaacctttcgttatgaaagagcttgttgaaaaaggtcttgct
cacaacattaagagtgcgaaacgtaaaattgagcgcgtacagcctgaagtatgggatgta
ctcgaatcagttattaaggagcatccggtacttctgaaccgtgcccctacacttcacaga
ttaggtatccaagcgtttgaaccaacgcttgttgaaggacgcgcaattcgccttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcagttcacgtacca
ttatctgctgaagctcaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactgggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagctgttgca
gctaactcccttaagaatgtgacatttaccgaagaacagcgctcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccagaatcattcccttacatgaatgaa
ccgacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgcc
gatgtgaaagctgtcattgaacagcagccaatcaatgcaccgtttaaaaaaggtattttg
ggtaaaatcatcgcggaaatctttaaacgattccatatcacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcaaatattcaacaaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaggaagcgcaaagcaaagta
gataacgtcatgaagcaattccgacgtggtctaatcactgaagaagaacgctatgagaga
gttatctctatctggagtgctgccaaagatgttatccaaggcaaactgatgaagtcactt
gatgagctcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcgtctaac
tttacgcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgaa
ttaccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccact
cacggtgcgcgtaaaggtcttgccgataccgcccttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgcgcaggatgttatcattcgtgagactgattgcggaact
gaccgaggcatccttgctcagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggccgttttgcacgaaaacaagtgaagcatcctgaaacaggtgaagtg
cttgtaaatgaaaacgaactgattgatgaagataaagcactggaaattgtagaagccggt
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcggt
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgccggagacgatatcacacagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
atcaatgaagttcgtgataagcaacaggaaattgtggttcaaggcgcagtggaaacacgc
tcttatacagcaccttataactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagagcttcttaaagtgactgacctg
actactgttcaagagtaccttctccacgaggtccaaaaggtttaccgtatgcagggtgtt
gaaatcggtgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtccgcgta
attgacgccggtgacactgatgtgcttccaggtacattgcttgatattcaccaatttact
gaagcgaacaaaaaagtattgcttgaaggcaatcgtcctgctacaggccgtcctgtcttg
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacacgtgtccttacagacgcagcgatcaaaggtaagcgtgatgagcttctcggc
ttgaaagagaatgttatcatcggtaagcttgttccagctggtacaggaatgatgaaatac
cgtaaagtaaaaccagtttcaaatgttcagccaactgaagacatggttccggttgaataa
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