Bacillus rugosus: M0696_03835
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Entry
M0696_03835 CDS
T08218
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bry
Bacillus rugosus
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bry03009
]
M0696_03835 (rlmD)
Enzymes [BR:
bry01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
M0696_03835 (rlmD)
Ribosome biogenesis [BR:
bry03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
M0696_03835 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
MTS
Methyltransf_11
RrnaAD
N6_N4_Mtase
Methyltransf_32
Methyltransf_23
TPMT
UPF0020
Methyltransf_4
Ubie_methyltran
N6_Mtase
PCMT
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UPV79874
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All DBs
Position
772599..773993
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AA seq
464 aa
AA seq
DB search
MKMKPPVEKNEYYDVTFEDLTHEGAGVAKIQGFPIFVPNGLPEEKAQIKVTRVKKGFAFG
RLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFKQKQVKDVLERIGKLDLSNVT
VHPTLGMEDPWNYRNKAQVPVGEREGGLVAGFYQQRSHDIIDMSACLIQQSKNDETVQAV
KDICAKYGVKAYNEERHRGWLRHIMVRYGVVTGEMMIVFITRTNDFPHKAKIIEDITAQF
PHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLY
DKALEYAELQGEETVIDAYCGIGTISLFLAKQAKKVYGVEIVPEAIEDAKRNAELNGITN
AEFAVGEAETVIPKWYEEGITADTLVVDPPRKGCDEALLRTIVEMKPKRVVYVSCNPGTL
ARDLRVLEDGGYVTREVQPVDMFPHTNHVECVAVLYSKGAVNCY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaacccccagtagaaaaaaacgaatactacgacgtgacatttgaggatttg
acccacgaaggagcgggcgtcgcaaagatccaaggcttcccaatctttgtgccaaatggt
ctgccggaggaaaaagcacaaatcaaagtgacacgcgtcaaaaaagggttcgctttcggc
cgcctgatcgagctgaaggaagaaagcccgcacagaactgacgccccatgtccgatctac
aagcaatgcggaggctgccagcttcagcacatgacctacgaaggccagctcttgtttaaa
cagaaacaagtcaaagacgtcttagaacggatcggcaagctggacctgtcaaacgtcacc
gtacacccgacactcggcatggaagacccttggaactacagaaacaaagcgcaggtgccg
gtaggagaacgagaaggcggactcgtcgccggattctatcagcaaagaagccatgacatc
atcgacatgagcgcctgcctgatccagcaatccaaaaacgacgaaaccgtccaagccgtc
aaagacatttgcgccaaatacggtgtcaaagcctacaacgaagaacgccacagaggctgg
ctccgccatattatggttcgatacggcgtggtaacgggagaaatgatgatcgtcttcatt
acaagaacgaacgacttcccgcacaaagcgaagatcattgaagacatcacagcgcaattc
ccgcacgtcaaatccatcgtgcaaaacatcaacccaaacaaaacaaacgtcatctttggg
aacgaaacaaacgtcatctggggcgaagaatacatctacgacctcatcggagacgtcaaa
ttcgccatctccgcaagatcgttctatcaggttaacccagagcaaacaaaagtgctttat
gacaaagcgcttgagtacgcggagctgcaaggagaagaaaccgtcatcgacgcctactgc
ggcatcggaacgatttctctattcctggcgaagcaggcgaaaaaagtgtacggtgtagag
attgtgccagaagcaattgaagatgcgaaacgaaacgctgagctcaacggcatcacaaac
gctgagttcgcggtcggggaagcggaaaccgtgattccaaagtggtatgaagaaggcatc
acggccgacaccctcgtcgtcgacccgccaagaaaaggctgcgacgaagccctcctgcgg
acgattgtggagatgaaaccgaagcgggtggtgtacgtgtcctgcaatccaggaacgctt
gcaagagacctgcgggtgcttgaggatggcgggtacgtgacgcgcgaagtgcagcctgtg
gatatgttcccgcatacgaatcatgtggagtgtgtggctgtgctttattctaagggtgca
gttaactgttactaa
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