Bacillus rugosus: M0696_07930
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Entry
M0696_07930 CDS
T08218
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bry
Bacillus rugosus
Pathway
bry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0696_07930 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bry03019
]
M0696_07930 (rnjA)
Messenger RNA biogenesis [BR:
bry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M0696_07930 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
DUF5548
Motif
Other DBs
NCBI-ProteinID:
UPV80605
LinkDB
All DBs
Position
complement(1545967..1547634)
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVLNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRLPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDGFKI
SAGPDLISRGFVYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatgatcagactgctgttttcgccctcggaggtttgggcgaaatc
ggtaaaaatacgtatgcagttcaatttcaggatgaaattgtgctgattgatgcggggatc
aagtttcccgaggacgaactgctcggcattgactacgttatccctgattacacgtattta
gtcaaaaacgaagataaaattaaagggctttttatcacccacgggcacgaagaccacatc
ggcggtattccgtacctgctcagacaagtgaatattcctgtttacggcggtaaactcgcg
atcggcttacttcggaataaacttgaagagcatgggctattaagacagacgaaactgaac
attatcggtgaagatgatatcgtaaagtttcgcaaaacggctgtgtcattcttcagaaca
acacatagtattccggattcctacggtatagttgtaaaaacgccgccaggaaacatcgta
catactggagatttcaaattcgactttactccagtcggcgagccagcaaacttgacgaaa
atggccgaaatcggaaaagaaggcgtactgtgcctgctttcagacagcacaaacagtgag
aacccagagttcaccatgtctgaacgccgtgtcggagaaagcattcatgacattttccgc
aaggtagacggccgaattatcttcgctacatttgcgtcgaatattcaccgcttgcagcag
gtaattgaagctgctgtattaaatggaagaaaagttgccgtatttggacgtagtatggaa
tcggctatcgaaatcggacaaactctcggatatataaactgtcctaaaaatacatttatt
gagcataacgaaattaatcgtttgcctgccaataaagtaacgattttatgtacaggaagc
caaggggaaccgatggcggcattatcaagaattgcaaacggcacacaccgccagatttca
attaatcctggggatacagtcgtattttcttcgtcccctatcccgggcaacacaatcagc
gtaagccggacgatcaaccagctgtatcgcgcgggggccgaggttattcacggacctctt
aatgatatccatacatccggtcacggcggacaggaagaacagaagctgatgcttcgatta
atcaagcctaaattcttcatgccgattcacggtgagtacagaatgcaaaaaatgcatgtc
aaacttgcaacagattgcggcattcctgaagaaaattgctttatcatggataatggtgaa
gtattagcgcttaaaggcgatgaagcttcagttgccggtaaaatcccgtccggttcagta
tacattgacggaagcggcattggtgatattggtaatatcgtgcttcgcgaccgcagaatt
ctttctgaagaaggccttgttatcgtggttgtcagcattgacatggatggctttaagatt
tcagcgggacctgatttaatttccagaggatttgtgtacatgagagaatctggcgacttg
atcaatgacgctcaagaactcatctcaaaccacttacaaaaagtgatggaacgaaaaacg
actcaatggtctgaaatcaaaaacgagattacagatacgcttgcgccattcttatatgaa
aaaacgaaacgccgtccgatgatcctgccgatcattatggaggtttaa
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