Bacillus rugosus: M0696_11380
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Entry
M0696_11380 CDS
T08218
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bry
Bacillus rugosus
Pathway
bry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0696_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bry03019
]
M0696_11380
03400 DNA repair and recombination proteins [BR:
bry03400
]
M0696_11380
Enzymes [BR:
bry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0696_11380
Messenger RNA biogenesis [BR:
bry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M0696_11380
DNA repair and recombination proteins [BR:
bry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M0696_11380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UPV77475
LinkDB
All DBs
Position
complement(2287586..2289076)
Genome browser
AA seq
496 aa
AA seq
DB search
MTKLQQTLHQFFGFTSFKSGQEDIIRSILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLSRQERQFVLEHIHRYKFLYLSPEALQSPY
VLGKLKTVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKDTLQ
DVMNLLELQHAERHLNSVNRPNIALRVENAADTAEKINRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKSKTSSRADFYHGGMESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTDEEIANVIR
VLEETEERDERRLRDVLMQYGVGETQARMMIHLFMQGKTSIELIKREISYRMELKLEKMR
RVSFLLQRDGCLRQSMLTYFDESYEPDDGNLPCCSHCGFDLSLYEQKGERSKKAPLDSWS
SELQRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgttacatcaattttttggttttacttcctttaaaagcggg
caggaggacattattagaagcatactcagcgggaaggataccattgcgatgcttccgact
gggggaggaaaatcgctttgctaccagctccctggctatatgcttgacggcatggtatta
atcgtttctccattgctttctttaatggaggatcaggtacagcagctaaaagcacggggg
gaaaaacgtgctgccgctttgaacagcatgcttagcagacaggaaagacaattcgttttg
gagcatattcaccgctataaatttttgtacttgtctcccgaggctttgcagtcgccatat
gtattgggaaaattgaaaaccgtccccatcagcctattcgttattgatgaagcacattgc
atatctgaatgggggcatgatttcaggcctgactattcaaagcttggacagctgagaaaa
aaacttgggcaccctccggttcttgcattgaccgctacagctacaaaggatacgctgcaa
gatgtcatgaacctgctagaactgcagcatgccgaacggcatctcaactcagtcaatcga
ccaaacatcgcgctcagggtggaaaatgcggcggatactgccgaaaaaataaatagggtc
attcagctggttgaaaacctgcaaggtccgggaattgtttattgcccgacacggaaatgg
gctgaggaattagcgggtgaaattaaaagcaaaacgagcagcagagccgacttttaccat
ggcggtatggagtctggcgacaggattttaattcagcagcagtttattcataatcagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcattttcacctcccgcagacggctgaagcttttatgcaggaaatcggcagagcg
ggacgcgatggaaaacctagtgtcagcattttgctgcgggcgccaggggattttgaattg
caggagcagattatccaaatggagagtgttacagatgaagaaatcgccaatgtgatccgt
gtgcttgaggagacggaggagcgggatgagagaaggctgcgtgatgtattaatgcagtat
ggtgtcggagagacacaagcccgtatgatgattcatctctttatgcaggggaaaacatca
attgaactgataaagcgggagatttcatatcgcatggagctgaagctggaaaaaatgcgc
cgcgtatcttttctgcttcagcgtgatggctgtttaaggcaatctatgttaacctatttt
gatgaatcatacgagcctgatgacggaaacctcccgtgctgttcacattgcggttttgat
ctatccttgtatgaacaaaaaggagaacggagtaaaaaggcgccattagacagctggagt
tcggaattgcaacggatattcagcttgcagactgtaggtgagctgaactga
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