Bacillus rugosus: M0696_17235
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Entry
M0696_17235 CDS
T08218
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bry
Bacillus rugosus
Pathway
bry02020
Two-component system
bry02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bry00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M0696_17235 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M0696_17235 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bry03021
]
M0696_17235 (rpoN)
Transcription machinery [BR:
bry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M0696_17235 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_23
HTH_17
HTH_IclR
Sigma70_r4
HTH_11
MarR
HTH_Crp_2
YtzH
DUF1425
HTH_21
DUF1631
HTH_32
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UPV78530
LinkDB
All DBs
Position
complement(3387881..3389191)
Genome browser
AA seq
436 aa
AA seq
DB search
MDMKLQQVQVLKPQLTQELRQAITLLGYHSAELAEYIDELSLENPLIERKETDTPPLSYH
KTNKNRMNAQEAGLQLSDPQKTLQDVLKQQSLDMNLTNSEKKIFNYLIHSLDSNGYLEED
MEEAARRLSVSTKEAEAVLAKLQSLEPAGIGARSLQECILLQLQRLPNRNEQAEMLVSAH
FDAFAQKNWKALSKETGIPLHTIQDISDDIAALHPRPGLLFARPEQDVYIEPDIFITVKN
GHIAVELNTRSFPEIDLHPQYRTLLSSGSCQDTASYLSAKYQEWRWLSRALRQRKQTITR
IVNELITRQKDFFLKGRSAMKPLTLREIADCLSLHESTVSRAIKGKTMQTPYGLFEMKLF
FSAKAEASGDGDASNYAVKTHLEDLVNHEDKTKPLSDQKLADLLYEQHGIQISRRTVAKY
RDQMNIPSSAARKRYK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaacttcagcaagtacaagtattaaagcctcaactgacacaggagctcagg
caggccatcacgctgcttggctatcattcggcagaactcgccgaatacattgatgagctc
tcactggaaaaccctcttattgaacgaaaggaaacagacacaccgccattatcttaccat
aaaacaaacaaaaacaggatgaatgcacaggaagcaggccttcaattaagtgatccgcaa
aaaacactgcaggatgtattaaaacagcagtcactcgatatgaatctgacaaactccgaa
aaaaagatttttaattatctgattcattcgcttgattcgaacgggtacttggaagaagat
atggaggaggcagcacggcgactatctgtttccaccaaggaagcggaagcggttttggca
aaactccagtcgttagagcctgctggaatcggcgcaagatctctgcaagaatgcattctt
ctccaattacagcggctgccgaacagaaatgaacaagcggaaatgcttgtttctgctcat
tttgatgcttttgcgcaaaagaactggaaagcgctttcaaaggaaacgggaattccgctt
catacgattcaggatatctctgatgacatcgcagctcttcatccaagaccgggccttcta
tttgcaaggccggagcaagatgtgtatatcgagcctgacatttttatcaccgtgaaaaac
ggtcacatcgcagtggagctgaacacccgctcgtttccagagatagacctgcatccgcag
tacagaacacttttatcgtccggctcctgtcaggataccgcctcttatttatctgcgaaa
taccaggaatggcgctggctgagccgcgcgctgcgacagcgaaagcagacgatcacgaga
attgtcaatgagctgatcactcgccaaaaggatttctttctgaaagggcgaagcgcaatg
aagccgctgactctcagagagatagcggactgcctaagccttcatgaatcaactgtgagc
cgggcaatcaaagggaaaacgatgcaaacgccgtacggactgtttgagatgaaactcttt
ttctcagcaaaggccgaggcttcgggagatggagacgcgtctaactatgcagtcaaaacg
catctagaagacctggtcaatcatgaggacaaaacaaaaccgctctcagatcaaaagctt
gccgatttgctatatgaacagcacggcatccaaatttccagacgcacagtcgcaaaatac
cgcgatcaaatgaacatcccgtcatcggcagcgagaaaacggtataaataa
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