Brachybacterium vulturis: CFK38_09445
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Entry
CFK38_09445 CDS
T05108
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
brz
Brachybacterium vulturis
Pathway
brz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFK38_09445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brz03019
]
CFK38_09445
03400 DNA repair and recombination proteins [BR:
brz03400
]
CFK38_09445
Enzymes [BR:
brz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK38_09445
Messenger RNA biogenesis [BR:
brz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFK38_09445
DNA repair and recombination proteins [BR:
brz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFK38_09445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Dimerisation
HEM4
Motif
Other DBs
NCBI-ProteinID:
ATG51720
UniProt:
A0A291GNR3
LinkDB
All DBs
Position
complement(2107636..2109831)
Genome browser
AA seq
731 aa
AA seq
DB search
MDSTSPTLQDEALEALRALTGRAEATFHAGQFEAIAALVEQRRRVLVVQRTGWGKSAVYF
LAALLQRRRGSGPALIISPLIALMRDQVAAARRAGVRAEAISSANPTEWARIEQALDGDE
IDVLLVSPERLVNPRFRQEQLPRLVQRCGLLVIDEAHCISDWGHDFRPDYRRLRDLVAEL
GPEVPVLATTATANSRVVEDVAEQLGVHGDGASPVLTLRGALTRDSLRLGCLSLPDDRER
LTYLVEQLDALPGSGIIYTLTVSAAEDLAALLDRPERRVRAYTGRTDAEERAELEQALKD
NEVKALAATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATDTAEVLLLPGRED
RAIWEYFATASMPSQASAGAVLDALASADRPLSTPALEARVDVRRTALELLLKVLAVDGA
AANVKGGWIATGTPWTYDGQRYENVARARREEQQAMLEYERLQPGDPQQCRMMFLARQLD
DDTATPCGRCDVCAGPWYPMLGAHAEGVQDAAAQRVSAVLDRVGVPVAPRAQWPQGLDRL
GVLDENGNVPRGNLPATLRAEEGRALARTSDLGWAGVLRQVLRTDEEGRPIDSEVPDVLG
RRIVEVLAAWDWQQRPAAVVAVPSLTRPQLVGSLAAGIASVGRLTDLGRLGLAPQAAPLR
SGGNSAFRLADLWDRFVVTAELQQSLAGLDGAPLLLVDDTISTRWTMTVAARALRRAGAG
PVLPLALALEA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggactccacctcccccactctgcaggacgaggcgctcgaggcgctgcgtgccctgacc
ggccgcgccgaggcgaccttccacgccggccagttcgaggcgatcgcggcgctggtcgag
cagcgtcgccgtgtgctggtggtccagcgcaccggctggggcaagtccgcggtgtacttc
ctggccgctctgctgcagcgacgtcgcggctcgggaccggcgctgatcatctccccgctg
atcgcgctgatgcgcgatcaggtggcggccgcgcgacgcgccggggtgcgggccgaggcg
atcagctcggcgaatcccaccgagtgggcccggatcgagcaggcgctggacggcgacgag
atcgacgtgctgctggtctcccccgagcggctggtcaatcctcggttccgccaggagcag
ctgccgcgcctggtgcagcgctgcgggctgctggtgatcgatgaggcccactgcatctcc
gactggggccacgacttccgtcccgactaccgccggctgcgggacctggtcgccgagctc
ggccccgaggtgccggtgctggcgaccaccgcgacggcgaactcccgcgtggtggaggac
gtcgccgagcagctgggggtccacggcgacggcgcctcacccgtgctcaccctgcgcggc
gctctgaccagggactcgctgcggctgggctgcctctccctgcccgatgaccgggaacgg
ctgacctacctggtggagcagctggatgcgctgcccggctcgggcatcatctacaccctc
accgtctccgccgccgaggacctcgccgccctgctggaccgcccggagcgacgcgtgcgc
gcctacaccgggcgcaccgatgccgaggagcgcgccgagctcgaacaggcgctgaaggac
aacgaggtcaaagcactggccgcgaccagcgcgctgggcatgggcttcgacaaacccgat
ctgggcttcgtggtccacctgggggcgccgagctcgccggtggcctactaccagcaggtg
gggcgcgccgggcgcgccaccgacaccgcggaggtgctgctgctcccggggcgggaggac
cgcgcgatctgggagtacttcgcgaccgcctccatgccctcgcaggccagcgccggcgcc
gtgctggacgccctcgcctccgcggaccgaccgctgtccaccccggcgctggaggcccgg
gtggacgtgcgccgcaccgcgctcgagctgctgctgaaggtgctcgcggtcgacggcgcg
gcggcgaacgtcaagggcggctggatcgcgaccgggacgccgtggacctatgacgggcag
cggtacgagaacgtcgcccgggcccgccgggaggagcagcaggcgatgctcgagtacgag
cggctgcagcccggggatcctcagcagtgccggatgatgttcctcgcccgccagctcgat
gacgacaccgcgacgccctgcggccgctgcgacgtgtgcgccgggccctggtaccccatg
ctcggtgcacacgccgagggagtgcaggacgccgccgcgcagcgggtctccgcggtgctg
gaccgggtgggcgtgccggtggccccgcgggcgcagtggccccagggcctggaccggctg
ggggtgctcgatgagaacgggaacgtcccccgggggaacctccccgccaccctgcgggcc
gaggagggccgggcgctggcccgcacctcggacctcggctgggcgggggtgctgcgccag
gtgctgcgcaccgatgaggagggccgcccgatcgactccgaggtcccggacgtgctggga
cggcggatcgtcgaggtgctcgccgcctgggactggcagcagcgccccgccgccgtcgtc
gcggtcccctcgctgacccggccgcagctggtgggctcgctcgccgccgggatcgcctcc
gtgggtcggctgacggacctcggtcggctcgggctggctccgcaggccgctcccctgcgc
tccggcggcaacagtgccttccgcctcgcggacctgtgggaccgcttcgtggtcaccgcc
gagctgcagcagtcgctcgcggggctcgacggcgccccgctgctgctggtggacgacacc
atctccacgcgatggaccatgaccgtcgcggcccgcgccctgcgccgggccggtgccggt
cccgtgctcccgctcgccctggcgctggaggcctga
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