Brachybacterium vulturis: CFK38_09720
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Entry
CFK38_09720 CDS
T05108
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
brz
Brachybacterium vulturis
Pathway
brz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK38_09720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brz03400
]
CFK38_09720
Enzymes [BR:
brz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFK38_09720
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFK38_09720
DNA repair and recombination proteins [BR:
brz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFK38_09720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS91
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ATG51767
UniProt:
A0A291GNN3
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All DBs
Position
2166674..2167624
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AA seq
316 aa
AA seq
DB search
MPELPEVEVVRRGLAPRTVGRTVTDVELLDARIIRRQHGGIDRLRAGLVGSTLTAVVRRG
KFLWWRLADPDGAETGEALMGHLGMSGQLRIATADGATVTPGGPPAPSEGPAPDPQRHRR
LSLHLDDGTRVDLIDQRLFGGVWTSPLVEAADGALAGVGSPDALLPEGASHIARDLLDPA
VDLGAIARTLRARRSAVKALLLNQEIVSGIGNIYADEALWSARTRYDTPGTALSQRRALA
ILRAAREVMERALAVGGTSFDALYVNVDGRSGYFARSLNAYGREGEPCPRCGRLLRRVIY
QGRSSHFCPRCQRRTM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggtcgtccggcgaggcctcgccccccgcaccgtgggc
cgcaccgtcacggacgtcgagctgctcgatgcccgcatcatccgccgccagcacgggggc
atcgaccggctgcgcgccgggctcgtgggctcgaccctcaccgccgtggtgcggaggggg
aagttcctgtggtggcgtctcgccgaccccgacggcgccgagaccggcgaggcgctgatg
gggcacctggggatgagcggccagctgcggatcgcgacggccgacggggcgaccgtcacg
cccggcggaccgcccgcaccctccgaggggcccgcccccgacccgcagcgccaccgccgg
ctctccctccacctcgacgacggcacgcgggtggacctcatcgaccagcggctcttcggc
ggtgtgtggaccagcccgctggtggaggcggccgacggcgcgctcgccggggtcggcagc
cccgatgcgctgctgcccgagggcgcctcccacatcgcccgcgacctgctggacccggcc
gttgacctgggggcgatcgcccggaccctgcgggcccggcgcagtgcggtcaaggccctg
ctgctgaatcaggagatcgtctccgggatcgggaacatctacgccgacgaggcgctgtgg
agcgcccgcacccgctacgacacccccggcaccgcgctcagccagcgccgggcgctcgcg
atcctccgcgccgcccgcgaggtgatggagcgggcactggcggtgggcggcaccagcttc
gacgcgctgtacgtgaacgtcgacgggcgcagcgggtacttcgcacggtcactgaacgcc
tacgggcgtgagggcgagccgtgcccgcggtgcggtagattgcttcgacgagtgatctac
cagggcaggagcagtcatttctgcccccggtgccagcgcaggacgatgtga
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