Brachybacterium vulturis: CFK38_10170
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Entry
CFK38_10170 CDS
T05108
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
brz
Brachybacterium vulturis
Pathway
brz03030
DNA replication
brz03430
Mismatch repair
brz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK38_10170 (holA)
03430 Mismatch repair
CFK38_10170 (holA)
03440 Homologous recombination
CFK38_10170 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brz03032
]
CFK38_10170 (holA)
03400 DNA repair and recombination proteins [BR:
brz03400
]
CFK38_10170 (holA)
Enzymes [BR:
brz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK38_10170 (holA)
DNA replication proteins [BR:
brz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK38_10170 (holA)
DNA repair and recombination proteins [BR:
brz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK38_10170 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
DUF4381
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ATG51847
UniProt:
A0A291GNV6
LinkDB
All DBs
Position
2272282..2273268
Genome browser
AA seq
328 aa
AA seq
DB search
MSDVEWHSVALAPIVLVHGTETLIADRAVQRLRGLAREADPTVEVHDLTGDAAGPGALAQ
VASPSLFGEPRFVVVPELQSAPDTLVLELLDYLRAPEQDVTLVLVHRGGNRGKKLLDALK
KAGVPRVDASPVKRAGDKQSFVAAEFARAQRRIQPEALIALVDAFGTDLAELAAISRQLI
EDSTPEPGEQAPQVSVADVHALTAGRVESTAFAVADAAIAGREQDALQLLQQAQLAGADP
VPIVAAIASKMRSLAKVTAPEASARTLGMPDWMLRSLGREARHWNDRSLARALEAVARAD
HEVKGAGRDARWSVQRMVMGICRARRAH
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtcgagtggcacagcgtcgccctcgcaccgatcgtgctggtccacggcacc
gagaccctgatcgccgaccgcgccgtccagcgcctgcgcggcctcgcccgcgaggccgat
cccacggtggaggtccatgacctcaccggggacgccgccggccccggggcgctggcccag
gtggcgagcccgtccttgttcggcgagccccgcttcgtggtggtgcccgagctgcagtcg
gccccggacaccctggtcctcgagctgctggactacctcagagccccggagcaggacgtc
accctggtgctcgtccaccgcggcggcaaccgcggcaagaagctgctggacgcgctgaag
aaggccggcgtgccgcgggtcgatgcgagccccgtcaagcgcgcaggtgacaagcagagc
ttcgtggccgcagagttcgcgcgggcgcagcgccgcatccagcccgaggcgctgatcgcg
ctcgtcgacgccttcgggaccgacctggccgagctcgccgcgatcagccggcagctgatc
gaggacagcaccccggagcccggtgagcaggccccgcaggtgtccgtggccgatgtccac
gcgctgaccgccggccgggtcgaatccaccgccttcgccgtggcggacgccgcgatcgcc
ggtcgcgagcaggacgccctgcagctgctccagcaggcgcagctcgccggtgccgacccc
gtccccatcgtcgccgcgatcgcctccaagatgcggtccctggcgaaggtcaccgcccct
gaggccagcgcccgcaccctcggcatgcccgactggatgctgcgcagcctcggccgcgag
gccaggcactggaacgaccgctcgctggcccgggcgctcgaggcggtggcccgtgccgac
catgaggtcaagggcgccgggcgcgacgcccggtggtcggtgcagcgcatggtgatgggc
atctgccgcgcccgccgcgcgcactga
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