Brachybacterium vulturis: CFK38_16455
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Entry
CFK38_16455 CDS
T05108
Name
(GenBank) exonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
brz
Brachybacterium vulturis
Brite
KEGG Orthology (KO) [BR:
brz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brz03400
]
CFK38_16455
Enzymes [BR:
brz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK38_16455
DNA repair and recombination proteins [BR:
brz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CFK38_16455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Bombinin
Motif
Other DBs
NCBI-ProteinID:
ATG52934
UniProt:
A0A291GSJ9
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All DBs
Position
3659808..3663080
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AA seq
1090 aa
AA seq
DB search
MSFTLINASAGSGKTHRLTHEIADRIGEGLHPSQLIATTFTRKAASELVDRVHRTLLEQH
RFDDAQGVGSALIGTVNSVAGRLVREFALDLGISPDVQELDEARQKAAFSSAIDEAAAEA
GSRASDLLARTEHDGEEDPTFTYGSSPSWRAHVRALAEKARTNGIGAQQLRDAADAAWQE
YREAAELVEGPDRRAAWLSGLDTAIRGLQEDLAASEDPAPGAGKPPIAKGSLNAVRKGID
ALESLRRTLERRDRAPWSQWAKLAAVTASKAAGGEKGYVYGKDTDTALVGLAQQIEAELP
ANPQLQADVRALITLVMTTAATSLDAYARYKDELGLMDFIDQEVLALEVLHHSERARTAV
RSRFRLLAVDEFQDTSPIQLALFLALGELVEDLIWVGDPKQAIYSFRDADPDLMLGVLEE
IRSGSSALGAGTVDDLEHSWRSQDQVLELVNQVFPRIFPTLPREQVVLTAAPAAARGRAE
RGHPQGRLEAWTPQYSGRRSQAAHARGIADGVLALLGEDGVGPEDVAVLVRSNAQGAGVV
EALTARGIPASGEGVPLLASREGRILRAALAVTLDGSDTLALTELVDLLTVHPAHGRWFA
QLTAAPDAEARQQVFRSWWQADVLAGLRSLREECISLTPVEMITALADALDLPELIRSWS
TPDQRLRTLDALRKVAAEYADQARSASAPITLTGLRAVLEDTDRGPDLTGTPGTVWVGTI
HGAKGLEWPQVVVMQQDVKEHSATSGVFVVPAAELDVMQPLAGRSLRYWPTVLPRFAPLQ
ERLAESAHALRSAGTERDEAGRLQYVALTRAKDVTVLSGHGSAPVLDALLPEPGADPLVG
WEVGTEALQVGAVSLPAVVRATATEVDEDSPGYRSGRSPLAATDLSPQRPATVRGASARF
QASGAGSREELGTVQEPVRIGPRLVPAGGQGWERVGEAVHGYLALPLRALDAEQRERAAR
RLVQRWSVERALGAEALIGAGQAWLDHVDAAFPGAEELTEQPITWWNEDDQVMEGWVDTL
LRLPEGQIVLVDHKSYPGDDPVGQVRKEYLGQMATYSRALAAAGRAPERILLHLPLRGEV
VEVELPEHAR
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaccctgatcaacgcctcggcggggtccggcaagacccaccggctcacccac
gagatcgccgaccgcatcggggagggcctgcacccctcgcagctgatcgcgaccaccttc
acccgcaaggcggcctccgagctggtggaccgcgtgcaccgcacgctgctggagcagcac
cgcttcgacgatgcccagggcgtcggcagcgccctgatcggcaccgtcaactcggtggcg
gggcgcctggtgcgcgagttcgccctggatctcgggatctcccccgacgtgcaggagctc
gacgaggcccggcagaaggccgcgttctcctccgcgatcgacgaggccgccgccgaggcg
ggatcccgcgccagcgatctgctggcccgcaccgagcacgacggcgaggaggatcccacc
ttcacctatggcagttctccgtcctggcgggcccatgtgcgcgctctcgccgagaaggcc
cgcaccaacggcatcggcgcccagcagctgcgggacgcggccgatgccgcctggcaggag
taccgcgaggcggcggagctggtggagggaccggaccggcgggccgcctggctcagcggc
ctggacacggcgatccgtggcctgcaggaggacctcgccgcctcggaggatcccgccccc
ggagcggggaagccgccgatcgccaagggctcgctgaacgcggtgaggaaggggatcgac
gccctggagtccctgcgccgcaccctggagcgtcgcgaccgggccccctggtcccagtgg
gcgaagctcgccgccgtcaccgcgtccaaggccgccggcggcgagaaggggtacgtctac
ggcaaggacaccgacaccgcactggtggggctcgcgcagcagatcgaggccgagctgccg
gcgaacccgcagctccaggccgatgtgcgggcactgatcaccctcgtcatgaccaccgcg
gccacctccctggacgcctacgcgcggtacaaggacgagctggggctgatggacttcatc
gatcaggaggtcctcgccctggaggtgctgcaccacagcgagcgggcccgcaccgccgtc
cgttcccggttccggctgctcgcggtcgacgagttccaggacacctcccccatccagctc
gccctgttcctggctctcggcgaactggtcgaggacctgatctgggtgggcgatcccaag
caggcgatctacagcttccgcgacgcggatccggacctcatgctcggggtgctggaggag
atccgctccggctcctccgcgctcggcgcgggcaccgtggacgatctcgaacactcctgg
cgctcccaggaccaggtgctcgaactggtcaaccaggtgttcccccggatctttccgacg
cttccccgcgaacaggtggtgctgaccgcggcgcccgcagcggcgcgcggtcgggccgag
cgcggccacccgcagggccggctcgaggcctggaccccgcagtacagcggccgccggtcc
caggccgcgcacgcccgcggcatcgccgacggggtgctcgcgctgctcggcgaggacggg
gtgggtcccgaggacgtcgcggtgctggtccgctccaacgcccagggcgcaggggtggtc
gaggcgctcaccgcccgggggatccccgcctccggcgagggcgtgcccctgctcgcctcc
cgggagggtcggatcctgcgcgccgccctcgccgtcaccctcgacggcagcgacaccctc
gccctcaccgagctggtggacctgctgaccgtccatcccgcgcacggccgctggttcgcc
cagctcaccgccgcaccggatgccgaggcccgccagcaggtcttccgctcctggtggcag
gccgatgtgctcgccgggctgcggagtctgcgcgaggagtgcatctccctcacccccgtc
gagatgatcactgcgctggccgacgccctcgacctgcccgagctgatccgctcctggtcc
accccggaccagcgattgcgcaccctggatgccctgcgcaaggtcgctgcggagtacgcc
gaccaggcccgctccgcctccgccccgatcacgctgaccgggctgcgggcggtgctcgag
gacaccgatcgcggaccggacctgaccggcaccccgggcaccgtctgggtgggcacgatc
cacggtgcgaaaggcctggagtggccccaggtggtggtcatgcagcaggacgtcaaggag
cattccgccaccagcggggtgttcgtggtcccggccgcggagctggacgtgatgcagccg
ctggccggccgctccctgcgctactggccgacggtgcttccccgcttcgccccgctgcag
gagcggctcgcggagtccgcgcatgcgctgcgcagtgccgggacggagcgggacgaggcc
ggacgcctgcagtacgtcgcgctcacccgggcgaaggatgtgacggtgctcagcggccac
ggctccgcaccggtgctggacgcgctgctgccggagccgggagcggatcccctggtgggc
tgggaggtcggcaccgaggcgctgcaggtcggagccgtgtcgctgcccgcagtggtccgg
gcgacggcgaccgaggtggacgaggactcccccggataccgctccggtcgcagcccgctg
gccgcgaccgatctgtcgccgcagcgtcccgccaccgtgcggggcgcgtccgctcggttc
caggcctcgggggccggttcccgggaggagctcggcaccgttcaggagccggtgcggatc
gggccacggctggttccggcgggcggtcagggctgggagcgggtgggcgaggccgtgcac
ggctacctcgccctgcccctgcgcgccctcgacgcggagcagcgggagcgggccgcacgg
cgactggtgcagcggtggagcgtggagcgggcgctcggcgccgaggcgctgatcggagcg
ggacaggcctggctggaccatgtcgatgccgccttccccggcgccgaggagctcaccgag
cagccgatcacctggtggaacgaggacgaccaggtgatggagggctgggtcgacaccctg
ctgcggctgcccgaggggcagatcgtgctggtggaccacaagtcgtatccgggcgacgat
ccggtcgggcaggtgcggaaggagtacttggggcagatggcgacctactcccgcgcgctg
gcggcggcggggcgggcccccgagcggatcctgctgcacctgccgctgcgcggtgaggtg
gtcgaggtggagctgcctgagcatgcacgctga
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