Phocaeicola salanitronis: Bacsa_0630
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Entry
Bacsa_0630 CDS
T01433
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bacsa_0630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsa03019
]
Bacsa_0630
Enzymes [BR:
bsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bacsa_0630
Messenger RNA biogenesis [BR:
bsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bacsa_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
SMC_N
AAA_7
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADY35226
UniProt:
F0R0J0
LinkDB
All DBs
Position
674669..675925
Genome browser
AA seq
418 aa
AA seq
DB search
MKFTELNLEESVLDALDAMNFKECTPVQEQTIPVILEGRDLIGVAQTGTGKTAAYLLPVI
NQLSKGGYPADAINCVIMAPTRELAQQIDQQMEGFSYFMPVSSVAIYGGNDGIRFEQEKK
GLTLGADVVIATPGRLISHLSLGYVDLSKVSFFILDEADRMLDMGFSDDIMQIVKYLPKE
RQTIMFSATMPAKIQQLAQSILHDPAEVKLAVSKPADKIIQAAYICYEAQKLGIIESLFR
QQEPERVIIFASSKLKVKEVTKALKRLKLNVGEMHSDLEQSQRDEIMHEFRNGRINMLVA
TDIVARGIDIDDIRLVINYDVPHDSEDYVHRIGRTARANNDGCAITFVSENEQTRFKQIE
DFLGKEIYKLPVPAELGEAPVYAPHTSSRNKPGNKGKGGWKKRSFNNRRPQKKGGSKQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttactgaactgaatttggaagagagtgtcttggatgcactcgatgcgatgaac
tttaaagaatgtactccggtgcaggaacagaccatccctgtcattttagagggtagagac
ctgataggcgtggcgcaaacgggtacaggcaaaaccgcagcttatttgttgcccgtcatc
aaccagctgagcaagggaggatatcctgccgatgccatcaattgtgtgattatggcaccc
acccgtgaactggcacagcaaatcgaccagcagatggaaggcttttcttattttatgcct
gtctccagtgtagccatctatggaggaaatgacgggatacggttcgaacaggagaagaaa
ggattgacactgggagcagatgtcgtgattgctactccgggacgtctcatcagtcatttg
agtctggggtacgtcgatttgtcgaaagtctccttttttatacttgacgaagccgaccgg
atgttggatatgggtttttcggatgacattatgcagattgtgaaatacctgcccaaggaa
agacagacaatcatgttctccgccacgatgccagccaagatacaacaactggcacaaagc
atcctgcatgaccctgcggaagtaaaacttgcggtatcaaaacctgccgacaaaatcatt
caggcggcatacatttgctacgaagcgcaaaagttaggcatcatcgaaagcctgttcagg
cagcaggaaccggaacgggtcatcatttttgcgtcttcaaagctgaaagtaaaagaggta
accaaggcattgaagcgactcaagttgaatgtgggcgagatgcactccgaccttgagcag
agccagcgtgacgagattatgcacgagttccgtaacgggcgcatcaacatgctggtagct
accgatattgtggcacgaggcattgacatcgatgatatccgtttggttattaattacgat
gtgcctcatgacagcgaagactatgtgcaccgtatcggacgtacggcacgcgccaacaat
gacggatgtgccattacgtttgtcagtgaaaatgaacaaacccgcttcaagcagatagag
gattttttagggaaagagatttataagctgcctgtcccagccgaattgggcgaagctcct
gtttatgccccgcacaccagcagccggaacaaacccgggaacaagggaaaaggaggttgg
aaaaaacgttcgttcaacaaccggcggcctcagaagaaaggcggaagcaagcaatag
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