KEGG   Phocaeicola salanitronis: Bacsa_1261
Entry
Bacsa_1261        CDS       T01433                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
bsa  Phocaeicola salanitronis
Brite
KEGG Orthology (KO) [BR:bsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bsa03016]
    Bacsa_1261
Enzymes [BR:bsa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     Bacsa_1261
Transfer RNA biogenesis [BR:bsa03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    Bacsa_1261
 Prokaryotic type
   tRNA splicing ligases
    Bacsa_1261
SSDB
Motif
Pfam: RtcB Mod_r
Other DBs
NCBI-ProteinID: ADY35835
UniProt: F0R728
LinkDB
Position
1404649..1405914
AA seq 421 aa
MRTIQNHDVKIFTDNIEATAIEQIERLLTIPVFSDCKIRIMPDVHAGAGCVIGFTGNLGD
KVIPNIVGVDIGCGILVQPFACMKEINYHALNEFILHHIPSGRNYRDNRYAPLPQKYMDA
YRESKDLIKQLRSYRELKETKRLNLSIGSLGGGNHFIELNKDENDLFYLVVHTGSRNLGK
QVAQIYQQLAVKCQSGWAELMEEQNHLIAAYKQAGRKDELQDVIRELHNSFKMRKPAIPA
DLSYLEGTYREDYLHDMRLCQQWAKINRRMITGLIMDYLITQGVTEKQDTGLLFESVHNY
ISDDNLIRKGAIAARTGEKCIIPLNMRDGSLICIGKGNEDWNSSAPHGAGRIMSRSQAFK
EISIDDYARSMQNIYTECVNEDTKDESPMVYKPKEEIIQNISDTVSVVNVIKPVYNFKAA
E
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagaaccattcagaatcacgacgtgaagatattcacggacaacatcgaggctactgcc
attgagcaaatagagcggttgctgactatcccagtgttcagcgattgcaaaatccgcatc
atgcccgacgtacatgccggagccggatgtgtcatcggctttacgggtaatctgggcgac
aaggttatccccaatattgtaggggtggacatcggttgcggcatcctggtacaaccgttt
gcctgcatgaaagagataaattaccatgccttgaacgagtttatcttacaccacattccc
tccggacgcaattatcgggacaatcgctatgccccgcttccacaaaagtatatggatgcc
taccgtgagagcaaagacctaatcaagcagttgcgtagctaccgggaactgaaagaaacc
aaacgcctcaacctttccatcggttcgctgggcggaggcaaccatttcatcgaattaaac
aaggatgaaaacgacctattttatttagttgtacataccggaagccgtaatctgggcaag
caagtggcgcaaatttatcagcaattggccgtaaagtgccaatccggctgggcagaactg
atggaagaacagaatcacctgattgcagcatacaagcaagccggacggaaagacgagtta
caggacgttatccgcgaactgcacaattcattcaagatgcgcaaacccgccatacctgct
gatttatcctatctggaaggcacttatcgggaggactacctgcacgacatgcgcctttgc
cagcaatgggcgaagataaaccgccgcatgattacaggactcatcatggattacctgatt
acgcagggagtcaccgaaaaacaagataccggactcctatttgaaagtgtccacaactac
atcagcgatgataacctcatccgcaaaggagctatcgctgcccgtaccggagagaaatgt
atcattccgctgaacatgcgcgacggttccctcatctgcatcggcaagggcaatgaagac
tggaactcttcagccccgcatggtgcaggccgcatcatgagccgaagccaagcctttaaa
gaaatcagtatagacgactatgcccgatccatgcagaatatctatacagaatgcgtgaac
gaagacactaaagacgaatcccctatggtatacaaaccaaaagaggagattattcaaaac
atcagtgatacggtgtcggtggtaaatgtgataaaaccggtgtataactttaaggcagcg
gagtaa

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