Phocaeicola salanitronis: Bacsa_1293
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Entry
Bacsa_1293 CDS
T01433
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa03030
DNA replication
bsa03430
Mismatch repair
bsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bacsa_1293
03430 Mismatch repair
Bacsa_1293
03440 Homologous recombination
Bacsa_1293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsa03032
]
Bacsa_1293
03400 DNA repair and recombination proteins [BR:
bsa03400
]
Bacsa_1293
Enzymes [BR:
bsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bacsa_1293
DNA replication proteins [BR:
bsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bacsa_1293
DNA repair and recombination proteins [BR:
bsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bacsa_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADY35865
UniProt:
F0R758
LinkDB
All DBs
Position
1432606..1433382
Genome browser
AA seq
258 aa
AA seq
DB search
MKLNLKNPLVFFDLETTGTNINTDRIVEICYLKIYPNGNEESKTMRINPEMHIPETSTAI
HGIHDEDVADCPTFKQIAKELAKSIEGADIAGFNSNRFDVPVLVEEFLRAGIDIDLSKRK
FIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLKAQLDRYPDTLQNDV
AFLSEYSTYSKNVDFAGRIVYDDNGVEVFNFGKYKGMPVAEVLKRDQGYFGWIMNGDFTL
NTKNVLTKIRLRESGLVK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatctgaagaatcctctggttttctttgacttggaaaccacaggaacgaat
atcaataccgaccgcattgtagaaatatgctacctgaaaatctatccgaacggaaacgaa
gagagcaagaccatgcggattaatccggagatgcacataccggaaacatctaccgccatt
cacggcatccatgacgaagacgtggcagactgccctaccttcaagcaaattgccaaggaa
ctggcaaaatccatcgaaggagcagacatcgccggcttcaactccaaccgcttcgacgta
ccggtgttggtagaagaattcctgcgtgcgggcatagacatcgacctgagcaaacgtaaa
tttatcgacgtgcaggtgatttaccacaaactggaacaacgcacgctatcggcagcttat
aaattctattgcgggaaaaacctggaagacgcacataccgccgaagccgatacacgtgcc
acgtatgaagtattgaaagcccaactcgaccgttacccggacaccttgcaaaacgatgtg
gctttcttgtctgaatattccacgtatagcaaaaacgtggactttgccggacggattgtt
tacgatgacaacggggtggaagtcttcaacttcgggaaatataagggaatgcccgtagca
gaggtcttgaaacgcgaccagggctatttcggctggattatgaacggtgatttcacattg
aacacgaaaaacgtattgacaaaaatcaggttacgcgagagcggattggtaaaataa
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