Phocaeicola salanitronis: Bacsa_1562
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Entry
Bacsa_1562 CDS
T01433
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa03410
Base excision repair
bsa03430
Mismatch repair
bsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bacsa_1562
03430 Mismatch repair
Bacsa_1562
03440 Homologous recombination
Bacsa_1562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsa03400
]
Bacsa_1562
DNA repair and recombination proteins [BR:
bsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Bacsa_1562
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Bacsa_1562
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Bacsa_1562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADY36133
UniProt:
F0QZN2
LinkDB
All DBs
Position
complement(1776130..1777854)
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AA seq
574 aa
AA seq
DB search
MNYKWNYQPPTQEEREAAKALAKEIGISPVLCRLLLERGITSAAEAKRFFRPQLNELHDP
FLMKDMSRAVERLNKAMGRKERIMVYGDYDVDGTTAVALVYKFLQQFYSNIDYYIPDRYN
EGYGVSKKGVDYAYETGVKLVIVLDCGIKAVEEIAYAKEKGIDFIICDHHVPDEVLPPAV
AILNPKRHDASYPYSHLSGCGVGFKFMQAFALNNGIEFQQLTPLLDLVAVSIASDIVPVM
GENRVLAYHGLKQLNTNPSIGLKAIIDVCGLSDRELTMSDIIFKIGPRINASGRIQNGKE
AVDLLIEKDFPLALQKARQINQYNETRKDLDKNMTEEANKIVDQLANLSQRRSIVIYNEA
WHKGVIGIVASRLTEIYYRPAVVLTRTNELATGSARSVSGFDVYKAIEYCRDLLENFGGH
TYAAGLSMKVENVPEFARRFEEYVTRHILPEQTSATIDIDAQLDFRDITSKFFFDLKKFN
PFGPENPKPVFCTMNVFDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSQARFIK
TKQSFNICYTIEENTHKRGDVQLQIEDIKPSRQA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaactacaaatggaactatcaacctcctacacaagaagaacgggaagcagctaaagct
ttggcgaaagagataggaatcagccctgtcctatgccgcttgttgctggagcgggggatt
acttccgccgcagaagccaagcgtttcttccgcccgcaactgaacgaactgcacgaccct
ttcctcatgaaagacatgagcagagctgtggagcgtcttaataaggctatgggacggaaa
gagcgcattatggtgtatggagattatgacgtggacggcacaaccgccgttgcgttggtg
tataaattccttcaacagttctattcgaacatcgattactatatccctgaccgttataac
gaggggtatggcgtatcgaagaagggagtggattacgcatacgagacgggtgtgaaactt
gtcattgtgttggattgcggcattaaggcggtagaggaaatcgcgtatgccaaagagaaa
ggcattgattttattatctgcgaccatcatgtgcccgatgaggtgttgcctcctgccgtg
gctattctgaaccctaaacggcatgatgcctcctacccgtatagccatctgtcgggatgc
ggggtgggattcaagttcatgcaggcttttgccttgaacaatggcatcgagttccagcaa
ttgaccccgcttcttgatttggtggcggtaagcattgcctcggacatcgtgcccgtaatg
ggcgaaaacagggtgctggcttatcatgggttgaagcaattgaacaccaaccccagcatc
gggctgaaggcgattatcgatgtatgcgggctttcggacagagagcttaccatgagcgat
atcatctttaagatagggccgcgcatcaatgcgtcgggacgcatccagaacgggaaagag
gctgtagaccttcttatcgagaaggattttccgctcgccttgcaaaaagcccgtcagata
aaccagtataacgagacacgcaaggacctcgacaagaacatgaccgaggaagcgaacaag
attgtagaccaattggcaaacctttcccagcggcgctcgattgtgatttataatgaggct
tggcacaagggcgtaatcggtattgtggcttcccgccttactgagatatactatcgtccg
gcggtggtgttgactcgcacgaacgaacttgctaccggctcggcacgttcggtgtcggga
ttcgatgtgtataaagccatcgagtattgccgcgacttgttggaaaacttcggcgggcat
acgtatgcggcaggtctttcgatgaaggtcgagaatgtgcctgagtttgcccggcggttt
gaggaatatgtcacccgccatatcttgcccgaacagacaagtgccacgattgatattgat
gcgcaattggatttcagggacattacgtcgaagttctttttcgacctgaagaagttcaat
cctttcggaccggagaatcccaagcccgtattctgtacgatgaatgtgtttgattatggg
acgagcaaggtggtagggcgtgatcaggagcatatcaagctggaattggtggacaacaag
tcaaacaatgtgatgaacggcattgctttcgggcaaagctcgcaagcccgtttcatcaag
accaaacaatcgttcaacatctgttataccattgaggaaaacacccacaagcggggagac
gtacaattgcagatagaagatatcaagccgagcagacaggcatga
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