Phocaeicola salanitronis: Bacsa_1907
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Entry
Bacsa_1907 CDS
T01433
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa02020
Two-component system
bsa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bacsa_1907
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bacsa_1907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsa03021
]
Bacsa_1907
Transcription machinery [BR:
bsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bacsa_1907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
KI67R
SF3b1
T3SSipB
Motif
Other DBs
NCBI-ProteinID:
ADY36464
UniProt:
F0R2D5
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All DBs
Position
2209006..2210490
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AA seq
494 aa
AA seq
DB search
MAIHSSQVQTQTQQQVQTLSPQQILAVKLLELPTVELEERVHAELLDNPALEEGKEPSED
DLHGDEGEDYATDQDGEPNTDYGEDLSLGDYRTEDDIPDYKLQENNRSKDDKPEDIPFSD
NVSFYETLKEQLDMQALTPEEKQLGEYLIGSLDDDGLLRKSIDTLIDELAIYQGINATPQ
EAEHVLSIIQDFDPAGIGARNLQECLLLQIKRKEDSPLKQTEYDIISKCCDEFTKKNKDK
ILQKLNITEKQYNDAVAELVKLNPRPGSSMGETIGKNIQQIIPDFIVETEDDGTVSLSLN
NHNVPELRLSREFTDMLDEHTRNKTNQSKESKDAMLFLKQKVDAAQNFINAVKQRQQTLM
STMQAIIDLQRPFFQEGDESLLRPMILKDVAERARLDVSTVSRVSNSKYVQTNFGIYPLK
FFFSDGYTTESGEELSVREIKRILKECVDHEDKNRPYTDDELAVILKEKGYPLARRTVSK
YRQQLNIPVARLRR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaatacattcaagtcaagtacagacacagacacagcaacaagtacagaccttgtcg
ccccaacagatattggcggtcaaattactggaactccctacggtagaactggaagagcgc
gtccacgcggaacttctggacaatccggcactggaagaaggcaaggagccttcagaagac
gacctgcacggcgacgagggggaagactatgccaccgaccaggacggcgagccgaatacc
gattacggagaggacctctcgctgggcgattaccgcaccgaagacgacatacccgattac
aagctgcaggagaacaaccgctcgaaagacgacaagcccgaagacatccctttctcggac
aacgtctctttctacgaaaccctgaaagaacagcttgacatgcaagccctgacgcccgaa
gaaaaacaattgggcgaataccttatcggctcgctcgacgacgacgggctcttgcggaaa
agcatcgacacccttatcgacgaactcgccatctaccaagggataaacgccacgccccaa
gaagcggaacacgtactttccatcatccaggacttcgacccggcgggcatcggcgcgaga
aacctccaagaatgcctcctgctgcaaatcaagcgcaaggaagattcgcccttgaaacaa
accgaatacgacatcatcagcaagtgctgtgacgagttcacgaagaaaaacaaggataaa
atcctgcaaaagctgaacatcaccgaaaagcaatacaacgatgccgtagcagaactggta
aagctcaacccgcgcccgggaagctcgatgggagaaaccatcggaaagaacatccagcaa
atcatccccgactttatcgtggagaccgaagacgacggcaccgtcagcctgagcctcaac
aaccacaacgtgcccgaactccgcctgagccgcgaattcaccgacatgctggacgagcac
acgcgcaacaagacaaaccaaagcaaggaatcgaaagacgccatgcttttcctgaaacag
aaagtagacgccgcgcaaaacttcatcaatgccgtcaagcagcggcaacagaccctgatg
agtaccatgcaggcgattatcgacctgcaacgccccttcttccaggagggagacgagtcg
ctgctgcgcccgatgattctgaaagacgtggcggaacgcgcacgcctggacgtgtcgacc
gtctcgcgcgtaagcaacagcaaatacgtgcagaccaacttcggcatctacccgctcaag
ttcttcttcagcgacggatataccaccgaaagcggggaagagctttcggtacgcgaaatc
aaacgcatcctgaaagagtgtgtagaccacgaagacaaaaaccgtccgtacaccgacgac
gaactggcggttatcctgaaagagaaaggctatccgctggcacggcgcaccgtatccaaa
taccgccaacagctgaacatccccgtggcacgattaagaagataa
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