Phocaeicola salanitronis: Bacsa_2317
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Entry
Bacsa_2317 CDS
T01433
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bacsa_2317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsa03021
]
Bacsa_2317
Transcription machinery [BR:
bsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bacsa_2317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
HTH_10
Tnp_IS481_C
PhyR_sigma-like
ATP-cone
Sigma70_ECF
HTH_38
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADY36865
UniProt:
F0R6H7
LinkDB
All DBs
Position
2686999..2687556
Genome browser
AA seq
185 aa
AA seq
DB search
MPDISFSFIYTSYYKKAFSFAKSYVHDEAVAEDIASEALIALWEKMEITSVEEIAPLLFT
ILKHKALDWLKHEQVRMTAFETFADWQSRELSLRISSLEACSPDGIFSNEIGRIVRQTLY
QLPEQTRQAFVLSRFKDKSNREIAEALGISVKGVEYHISKALKTLRVALKDYLPLLCFFY
PHLRF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgccggacatttcgttttcgtttatctacacctcttactataaaaaggcgttcagcttt
gccaagtcgtacgtccacgatgaggcggtagcagaggatattgcttccgaggcgctgata
gccttgtgggagaaaatggagataacgtccgttgaggagattgctccccttttatttact
attttgaagcacaaggcgctcgactggctgaagcacgagcaggtgaggatgacagctttc
gagacgtttgccgattggcagagccgcgagctttcccttcgcatctcgagcctcgaagcg
tgttcgcccgacggtattttttcgaatgaaatcgggcgtatcgtgcgtcagacgctctat
caacttcccgaacagacccgccaggcatttgtcttgagccgctttaaggacaagtcgaac
cgtgagatagccgaagcgttgggcatctcggtcaagggcgtggagtatcacatctcgaaa
gcattgaaaacgcttcgcgtagcgttgaaggattaccttcccttgctttgctttttctac
ccgcatttgcgattctga
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