Phocaeicola salanitronis: Bacsa_3355
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Entry
Bacsa_3355 CDS
T01433
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsa
Phocaeicola salanitronis
Pathway
bsa03030
DNA replication
bsa03430
Mismatch repair
bsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bacsa_3355
03430 Mismatch repair
Bacsa_3355
03440 Homologous recombination
Bacsa_3355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsa03032
]
Bacsa_3355
03400 DNA repair and recombination proteins [BR:
bsa03400
]
Bacsa_3355
Enzymes [BR:
bsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bacsa_3355
DNA replication proteins [BR:
bsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bacsa_3355
DNA repair and recombination proteins [BR:
bsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bacsa_3355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ADY37880
UniProt:
F0R5X4
LinkDB
All DBs
Position
3915683..3919480
Genome browser
AA seq
1265 aa
AA seq
DB search
MQDFVHLHVHTQYSILDGQASISRLVDKAMANGMKGIAITDHGDMFGIKEFFNYVNKKNG
GTNGEIKDLKKKVAALESGKVESENPEADIAACKEQIEVAKKKLFKPIIGCEMYVARNRL
TDKNGKPDQGGYHLIVLAKNLKGYHNLIKLVSKAWTQGFYMRPRTDRAELEKYHEGLIVC
SACLGGEVPRRITAGQFAEAEEAIQWYKNLFGEDYYLELQRHKATVPRANHETYKLQEVV
NKKLIEYARKYDIKLVCTNDVHFVDEENAEAHDRLICLSTSKDLDDPNRMLYTKQEWMKT
REEMNAIFSDVPEALVNTCEVCDKVEFYSIDHAPIMPTFSIPEEFGTEEEYRKRYSEKDL
FDEFTQDENGNVVMSEADAKAKIERLGGYEKLYRIKLEADYLAKLAYEGARRRYGADLTD
EVKERIKFELHIMKTMGFPGYFLIVQDFIAAARNQLDVSVGPGRGSAAGSAVAYCLGITQ
IDPIKYDLLFERFLNPDRISLPDIDVDFDDDGRGRVLNWVTEKYGQEKVAHIITYGTMAT
KLAIKDVARVQKLPLSESDRLCKLIPDKIPDKKLNLPNAIAYVPELQAAEVSSDPVLRDT
IKYAKMLEGNVRNTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEETG
LIKMDFLGLKTLSIIKEAIENIRHSKGIELNIDEIPIDDPATYQLYGEGQTIGTFQFESA
GMQKYLRELEPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPIMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGKKNGHDPKTL
EKIWADWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAATMSRNVSNITEITKLM
DECKAMGIRVLGPDVNESSMKFSVNYHGDIRFGLGAIKGVGESAVQSILVEREKNGVFKN
IFDFVQRVNLSACNRKNIENLALAGGFDSFSGIKREDFFVKNAKDETFVEILVRYGNRYQ
VDKAAAVNSLFGGEQAVEIATPEIVHAPAWSDLERLNKERELVGIYLSAHPLDEYAVILE
NVCNARMSQLADLTPLQNHDLTLGGVVTGVREGYTRTGKPYGVAKLEDYSGTADFAFFGN
DWVDKKNFFSEGMFLFMKGKCQPKQWKPDEWEVKINTIELLPEVKDRLIEKITVTMPLSV
INDEMIMELGSMVKDNPGNTELFFLIRDEDGQMYVNLMSRTLKISVHKDLVNYLKNQPLL
DYKIN
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattttgttcatttacatgttcatacgcaatattccattttggatggtcaggct
tccatatcccgcttggtagacaaagccatggcaaacgggatgaaggggatagccataacc
gaccatggagatatgtttggcattaaggaattcttcaattatgtgaataagaagaatgga
ggtacaaacggcgaaattaaagatttgaagaaaaaggttgctgctttggaaagtggcaag
gtagaatcagaaaatccggaagcggacatcgctgcttgtaaggagcaaatagaagttgcc
aaaaagaaattgtttaagccgattataggatgcgaaatgtacgttgcccgtaatcgtttg
acagataaaaacgggaaaccggaccaaggcggataccatttaattgtgttggctaaaaac
ctgaagggatatcacaacctgataaagttggtttcaaaagcttggacacaaggattctat
atgcgtccgcgtaccgatcgggcagagttggaaaaatatcatgaaggcttgattgtctgt
tcggcatgtttgggaggagaggtgccgagacgcattacggcagggcagtttgctgaggcg
gaagaagcgattcaatggtataagaatttgtttggcgaagattattatctggagcttcaa
cgccataaggctacggtgccgcgtgcgaatcacgagacatataagttgcaggaagtggtg
aataagaagttgattgaatatgcgcggaaatatgatatcaagctggtttgcacgaacgat
gtacattttgtagacgaagaaaatgcggaagcgcatgaccgtctgatttgtttgagtaca
agtaaggatttggatgatccgaaccgtatgttgtacacaaagcaagaatggatgaagacg
cgtgaggaaatgaacgccatattcagtgatgtgcccgaagcgttggtgaatacgtgcgaa
gtctgcgataaggttgagttttattccatagaccatgcgccgattatgcctacgttctct
attccggaagaatttgggacagaggaggaataccgcaagcgatattccgaaaaagacttg
tttgatgagtttacacaagatgaaaacgggaacgtggtgatgagtgaagccgatgcgaag
gcgaaaatagagcgtctgggcggttacgaaaaattataccgtattaagttggaggccgat
tatttggctaaactggcttatgaaggtgcccgtcggagatatggagccgatttgaccgac
gaggtaaaagaacgcataaagttcgagttgcatatcatgaagaccatgggtttcccgggt
tattttttgattgtgcaggattttatagctgcagcccgtaaccaattggatgtgtctgtc
ggtcccggacgtggttcggcggcagggtcggctgtagcttattgtttgggaattacacag
atagaccctattaaatacgatttgctttttgagcgttttttgaatcctgaccgtatttct
ttgccggatattgacgtcgattttgatgatgacggacgtggaagggtgctgaactgggta
accgaaaaatacgggcaagagaaagtcgcgcacatcattacttacggtacgatggctacc
aaattggcgattaaagatgtagcgcgtgtccaaaagctgcctctctcagagtcggatcgc
ttgtgtaagctgattccggataagatacctgataaaaagttgaatttgcctaatgccata
gcttatgtgccggaactgcaggcggcagaagtttcttccgatccggtattgcgcgatacg
attaagtatgcgaagatgttggaagggaatgtccgtaataccggtgtgcatgcctgcgga
acgattatttgccgggatgacattaccgattgggtgcctgtcagcaccgcggatgataag
gaaaccggcgaaaagatgctggttacccagtacgaaggttcggttatcgaggagaccggt
ttgataaagatggactttttagggttgaaaaccttgtccattattaaagaggcgattgaa
aatatccgccatagcaaaggcattgaattgaatattgacgagattcccattgacgacccg
gctacgtaccagttgtatggggaagggcagaccattggtacgttccagttcgaatcggca
ggtatgcagaaatacctgcgcgaacttgagccttctactttcgaggacttgattgccatg
aatgccctttatcgtccggggcctatggactatataccggatttcattgaccgtaaacat
ggccgtaagccgattgaatatgacattccgattatggaaaaatatttgaaggatacgtat
gggattacggtttatcaggagcaagtgatgttgctctctcgtttgcttgcagactttacc
cgaggcgaatcagacgccttgcgtaaagcgatgggtaagaagttgcgggataaattggac
cacatgaagccgaaatttattgaaggcgggaagaagaacggacacgatccgaaaacgctt
gagaagatttgggcggattgggagaaatttgcatcgtatgcttttaataagtcacatgct
acatgctattcatgggtggcttatcaaacagcttacctgaaggcgaactatccttcggaa
tacatggcggctaccatgagccggaacgtttccaatatcactgaaatcacgaagttgatg
gatgaatgcaaggcaatgggaataagggtgttaggaccggatgtgaacgagagtagcatg
aaattctcggtaaactaccatggggatatccgttttgggttaggtgccattaaaggtgtg
ggcgagtcggctgtgcaaagtattttggtggaacgggaaaagaacggagttttcaagaac
atctttgactttgtgcaacgggtgaatctgtctgcatgcaatcggaagaacattgaaaat
ttggcactggctggcggatttgatagcttttccggcatcaagcgggaggatttctttgta
aaaaatgcaaaagacgagacctttgtcgagatattggtgcggtatggaaaccgttatcag
gtagataaagccgctgcggttaattcgttgtttggcggagaacaggcggtagagattgca
actccggaaatcgtccatgctccggcttggagtgatttggaacgtctgaataaggaacgt
gaattggtcggcatttatctttctgcccatccgctggacgaatacgccgttatattagaa
aatgtatgtaatgcgcggatgagtcagttggcggatttgacacccttgcagaatcatgat
ttgactttgggaggggttgttacaggggtgcgcgaaggatacacacgtaccggaaagcca
tacggtgtcgccaagctggaagattattccggtacagccgactttgctttctttggaaat
gattgggtggacaagaagaatttctttagcgaaggcatgttcttgtttatgaaagggaaa
tgtcagcctaagcaatggaaacccgatgaatgggaagtaaaaatcaatacgattgaactt
ttgcctgaggtgaaagaccggttgatagaaaagattacggtcactatgccgctttctgta
attaacgatgaaatgataatggagttgggctccatggtgaaagataatccgggaaacaca
gaactgtttttcctgattcgggatgaagacgggcagatgtatgtcaacctgatgtcgcgt
acattaaagatttcagttcacaaagatttggtaaattatttaaaaaaccagccattgttg
gactataaaataaattag
DBGET
integrated database retrieval system
