Bacillus safensis: BSL056_02470
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Entry
BSL056_02470 CDS
T05386
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsaf
Bacillus safensis
Pathway
bsaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSL056_02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsaf03019
]
BSL056_02470
03009 Ribosome biogenesis [BR:
bsaf03009
]
BSL056_02470
Enzymes [BR:
bsaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSL056_02470
Messenger RNA biogenesis [BR:
bsaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSL056_02470
Ribosome biogenesis [BR:
bsaf03009
]
Prokaryotic type
rRNA helicases
BSL056_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
APJ09894
LinkDB
All DBs
Position
513237..514787
Genome browser
AA seq
516 aa
AA seq
DB search
MIIHEITETAIRRSLNKLTITFQDFQLSESLMKAINRMGFEEATPIQAETIPLGLQNKDV
IGQAQTGTGKTAAFGIPLVEKIDPASPNIQAIIIAPTRELAIQVSEELYKIGQDKRARVL
PIYGGQDIGRQIRSLKKNPHIIVGTPGRLLDHINRRTMRLQNVETVVLDEADEMLNMGFI
EDIEAILSNVPSEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLDI
HERKKFDTLTRLLDIQSPELSIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVA
LRKFKEGSIDVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGRTGMAMT
FITPREKDMLRAIEQTTKRKMDRMKEPTLDEAIEGQQQVTVDRLRTIISENNLNFYMTAA
AELLEDHDSVTVVAAAIKMMTKEPDATPVRLTDEAPMISKRHRNNRSSSKRRDGGGGGGY
RGKGKNSRSSYGDKKRSSNDRNRSSSDRRQKKSYNN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatcattcacgagattactgaaacagcaattagaaggagtttgaataaattgactata
acgtttcaagattttcaattaagcgaaagtctcatgaaggctattaaccgcatgggattt
gaagaagcaacaccgattcaagcagaaacgattcctctcggtcttcaaaataaagatgtc
atcggacaagcacaaacaggaacaggaaaaactgcagcatttggtattcctctggttgaa
aaaatcgacccagcgtctccaaatatccaagcgattatcattgcgccaacaagagaatta
gcgattcaagtatctgaagagctatataaaatcggacaagacaagcgtgcacgcgtactt
cctatttacggtggacaagatatcggccgtcaaatccgttcgctcaagaaaaatcctcat
atcatcgtagggactccaggacgtttactcgatcacattaaccgtcgtacaatgcgtctt
caaaacgttgaaacagttgtgctagatgaagcagacgaaatgctaaacatgggtttcatc
gaagacattgaagcgatcctttcaaatgtaccaagtgaacaccaaacacttttattctct
gcgacaatgcctgcaccaattaagcgcattgcagagcgtttcatgacaaacccagaacac
gtaaaagtaaaagcgaaagaaatgactgtatctaacatccaacagttctatttggatatt
cacgaacgtaaaaagtttgatacattgactcgtcttcttgacattcaatcacctgagctt
tcaattgtcttcggccgtacgaaacgccgtgttgacgaattgactgaagcacttaacctt
agagggtatacagctgaaggaattcatggtgacctgactcaagcaaaacgtatggttgcg
cttcgtaaattcaaagagggttcaatcgatgtgcttgtcgcaacagacgtagctgcacgt
ggacttgatatctcaggcgtaacacacgtgtataactttgacgtaccgcaagatccagaa
agctacgtgcaccgtattggacgtacaggacgtgctggacgtacaggtatggcgatgaca
ttcatcacaccacgtgaaaaagatatgcttcgtgcgattgagcaaacgactaaacgtaaa
atggatcgcatgaaagaacctacacttgatgaggcgattgaaggacaacagcaagtaaca
gttgaccgtctacgcacaatcatcagtgaaaacaacttgaacttctacatgacagctgct
gctgaattgttggaagatcatgattctgtaacagtggttgcagctgcgatcaaaatgatg
acaaaagagccggatgcaacgcctgttcgtttaacagatgaagcaccgatgatttctaaa
cgtcatcgtaacaaccgtagctcttctaaacgcagagacggcggcggtggcggaggctac
cgtggaaaaggcaagaacagccgttcatcttatggtgataaaaagcgttcttcaaatgac
cgcaatcgttcttctagcgatcgtcgtcaaaagaaatcttataacaactaa
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