Bacillus safensis: BSL056_09040
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Entry
BSL056_09040 CDS
T05386
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsaf
Bacillus safensis
Pathway
bsaf03410
Base excision repair
bsaf03430
Mismatch repair
bsaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSL056_09040
03430 Mismatch repair
BSL056_09040
03440 Homologous recombination
BSL056_09040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsaf03400
]
BSL056_09040
DNA repair and recombination proteins [BR:
bsaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BSL056_09040
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSL056_09040
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSL056_09040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
Peptidase_S46
DHHA1
UPF0180
Motif
Other DBs
NCBI-ProteinID:
APJ11095
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Position
1791986..1793686
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AA seq
566 aa
AA seq
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MEYRLIGKNDFEQDIVKNVLSNRGIYSSEMSSILCPTAVNEEPYSLLDNINKASDLLIEH
MKKNSNIFIQIDSDTDGITSSIILIKYIKKMFPKSKITYRMHEGKEHGIILDTVPDNTDL
VIIPDAGSNQYEIHKELKERGCDVLVIDHHECEDESQYAIVVNNQLSPNYLNKSLTGAGM
AYKVCQALDDKLGKNYAEEMLDLVAIGNIADSADTRCLETRYYISKGLEFIKNPFLKKLF
KKQEFSTNGVKTIQNTQFYINPLINAAIRVGSKKEKDQLIKAFLGSREKVLYKKRGSAVE
ELISIQDDTVRVLTNLKNKQKRLVAKATDEIVQKIYQENLLENKILSVNIEGILEKNLTG
LVANKLADMFKRPVLLARDAENDEFLTGSIRGYDTGEVKNFKELLISTGLFKFVEGHANA
AGFCIEKNSFKKMDLTLNEMLKDVEHKTILDVDFEIPFKLLKDDFILEIGNLRELWGYKL
EEPLVAIKDIHVSRSEIELIKKRTTTLKISSTQAEFKKQFYKNEFPQLLDESESYVLNCI
GKCKLSADNKPYIEIVDLEVVHSFLF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
ttggaatataggctaataggaaaaaatgattttgaacaggatatcgtcaaaaatgttcta
agcaatagggggatttatagctctgagatgagttctattttatgcccaacagcagttaat
gaggaaccctattctttattagataacataaataaagcttctgatttgctaatagaacat
atgaagaagaatagtaatatttttattcaaattgatagtgacactgacggcatcacttct
tctataattttaataaagtacataaagaaaatgtttccaaaatccaaaattacatatagg
atgcatgaagggaaagaacatggaattatcctcgatacagtgcctgataacactgattta
gtgataattccagatgcgggttctaatcaatacgaaatccataaggagcttaaggaaaga
ggctgtgatgtattagtcattgaccatcatgaatgtgaagatgagtcgcagtatgcaatt
gttgttaataaccagctttcaccaaattatttaaacaagtctttaacgggtgctggaatg
gcttacaaagtgtgtcaagctcttgatgataaactcggaaaaaactatgctgaagagatg
cttgacttagttgcgattggcaatattgctgattctgcagatacaagatgtttagaaaca
agatattacatatcaaaagggttagagttcattaaaaatccatttttgaaaaagctgttt
aaaaagcaggagttttcaaccaatggtgttaaaacaattcagaatacgcaattctatatt
aacccacttattaacgctgcgattagagtaggttcaaaaaaagaaaaagaccaattgatt
aaagcatttctcggttcaagagaaaaggttctatataaaaagcgtggatccgcagttgaa
gagttaatttcaattcaagatgatactgtaagagtactaacaaatttaaagaataaacaa
aagagattagttgctaaagcgactgatgaaattgtccaaaagatataccaagaaaatttg
ttagaaaacaagatactctctgtaaatattgaaggtattctcgaaaagaatctaacaggc
ttagtcgcaaataaactagccgatatgtttaaacgtccagttttacttgctagggatgca
gaaaacgatgagtttttaacaggttcgataagaggatatgatacaggagaggttaaaaac
tttaaagagttactgatatcaacggggctatttaaatttgttgaaggacatgcgaatgca
gcgggattttgtattgaaaagaatagttttaaaaaaatggatttgactcttaacgaaatg
ttaaaagatgttgaacacaagacaattcttgatgtcgattttgaaatcccatttaaactt
ctcaaagatgattttattttagagattggtaatctaagagagctatggggttacaaatta
gaagagcctttagttgcaatcaaggatattcatgtaagcagaagtgaaatagagctaata
aaaaaaagaacgactactctgaaaataagttcaacacaggcagagttcaaaaaacaattt
tataaaaatgaattccctcagctgttagatgaaagcgaaagttatgtattgaactgtata
ggaaaatgcaagctatctgccgataataaaccctatattgaaattgtagacttggaagtg
gttcatagttttctgttttag
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