Bacillus safensis: BSL056_14535
Help
Entry
BSL056_14535 CDS
T05386
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsaf
Bacillus safensis
Pathway
bsaf03030
DNA replication
bsaf03430
Mismatch repair
bsaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSL056_14535
03430 Mismatch repair
BSL056_14535
03440 Homologous recombination
BSL056_14535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsaf03032
]
BSL056_14535
03400 DNA repair and recombination proteins [BR:
bsaf03400
]
BSL056_14535
Enzymes [BR:
bsaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSL056_14535
DNA replication proteins [BR:
bsaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSL056_14535
DNA repair and recombination proteins [BR:
bsaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSL056_14535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
PEP_mutase
SSB
Motif
Other DBs
NCBI-ProteinID:
APJ12105
LinkDB
All DBs
Position
complement(2818247..2821582)
Genome browser
AA seq
1111 aa
AA seq
DB search
MSYVHLQVHSGYSLLSSAAKVKELVLKAKELGCKALALTDDHVMYGTVEFYKECKKHGIK
PVIGLTASVFIDEQETEAYPLVLLAKNNEGYQNLIKISSVLKSKSKAGLKEKWLKSYHRG
LIAITPGASGYIETLLQHDQLEEAREAANQLKHIFGEGHVYIALQPFQQDESLAGKLRDV
SQSTDIPLVATGDVHYINREDKMAYTCLKAIKAGKQLSEIEEDRGEKHFRSFEEMLEWYR
DDRELLTRTVEIANRCEVDLNLGQTKLPSYPTPDQSTADQFLRRVCAEGMKQRKLASNDM
YVKRLEYELSIIQKMNFSDYFLIVWDFMKYAHDKGIVTGPGRGSAAGSLVAYVLFITDVD
PIRHGLLFERFLNPERISMPDIDIDFPDTRRDEIISYVKDKYGDMHVAQIVTFGTLAAKA
ALRDVGRVMGIDSKAADRLAKLIPSKPGTTLKEAVTASSELKAMLQQSDELRKVFQTALK
VEGLPRHTSTHAAGVVLSEEPLTEVVPIQDGHEGVYLTQYAMNYLEDLGLLKMDFLGLRN
LTLIESIKNQIERQENVHINFSDISYEDQKTFELLSAGDTTGIFQLESQGMRQVLRRLKP
SSLEDIVAVNALYRPGPMENIPLFIDRKHGRVKVSYPHPDLYDILKDTYGVIVYQEQIML
IAAKMAGFQLGEADLLRRAVSKKDKKVLDEERSHFVEGCLKKEYPVNIANDVYDLIVKFA
NYGFNRSHAVAYSMIGFQLAYLKAHYPLYFMCGLLTSVIGNEDKIAQYFYEAKEKGISVL
KPSINKSEFPFTVEKGEIRYSLRAIKNVGVSAVKDIYRARQEKPFEDLFDFCARVSPKSV
NRKTIEALIFSGAMDEFYPNRASLLASIDIALDHVSFLNPEDQLDFLGDTTFSIKPKYAE
IEEMPLVDLLQFEKEALGLYLSNHPVQAYRDRLRENGAVEIIRLSSYIKRKISMGGLLTK
VKSIRTKNGQSMAFVTFGDETGEMEGVVFPEQFRKLSPLLEEGNMLYVEGRIEVRNDSSQ
IIVQEAALLEEMDAKRKESVYIRVKEENHTQELLEQVKRILSMHSGEADVYLYYEKQKKT
MRLPDAYKVHADHAVIFQLKELLGEQNVVIK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgttcatcttcaggtccacagtggatacagcttattaagcagtgcagctaaa
gtaaaggagcttgtgctgaaagcaaaagaacttggctgcaaggcgctcgctcttaccgat
gaccatgtgatgtatggcacggttgaattttataaggaatgtaaaaaacatggcatcaag
ccggttatcggtttaacagcttctgtcttcatagatgaacaagagacagaggcttatccc
ttggtactccttgcaaaaaacaatgaaggctatcaaaacctaatcaaaatcagcagtgtg
ctgaaatcaaaatcaaaagccggattgaaagagaaatggctcaaaagctatcaccgcggg
ctcattgccatcacaccaggcgcatctgggtatattgaaacgcttttgcagcatgatcag
ttagaagaagcgcgtgaagctgccaaccaattgaagcatatattcggcgagggacatgtg
tatatcgcacttcagccatttcagcaggacgaatcgctcgccggcaaactgcgggacgtc
tcacaaagtacagacattcctcttgttgcgacgggtgatgttcactatatcaatcgagaa
gacaaaatggcttatacgtgcttaaaagcgatcaaagcaggtaagcagctttcagagata
gaggaagaccgaggagaaaagcatttcagatcctttgaagaaatgttggaatggtataga
gatgatcgagagctgctgacaagaacggtggagattgcaaaccgctgtgaagttgattta
aatcttgggcagacaaaactcccatcttacccgactcctgatcaatcaacagcagatcag
tttttacgaagagtgtgcgcagaagggatgaagcaaagaaagcttgcttcaaatgacatg
tatgtcaaaaggcttgaatatgagctgagcattatccaaaaaatgaatttcagtgattat
tttctcattgtgtgggattttatgaagtatgcgcatgacaaagggattgtaacaggccct
ggacggggatcagcagcgggttcacttgttgcatacgttctgtttattacggatgtcgat
ccgatccgtcacggtcttttatttgagcgtttcttaaatccagagcgaatcagcatgccc
gatattgatattgatttccccgacacgagaagagatgaaatcatttcttatgtaaaagac
aaatacggagacatgcatgtggcgcaaattgtcacgtttggaacacttgcagcaaaagct
gctttaagggatgttggtcgtgtgatgggaattgattcaaaggcagcggaccgtcttgcc
aagctgattccatcgaagccaggaacgacgctgaaagaagcggtgactgcatcttctgaa
ttaaaagcgatgcttcagcaatccgatgagcttcgaaaggtcttccaaactgctttaaaa
gtagaaggcttaccaagacacacctcgacacatgcagctggtgttgtgctgagtgaggag
ccgctgacagaggtcgttccaattcaagacggccatgaaggtgtgtatttaacgcagtat
gcgatgaattatttagaagatctcggacttttaaagatggatttcttaggactcagaaat
ttaacattaattgaatccattaaaaaccagattgaaagacaggaaaacgtccacattaac
tttagtgacatttcatatgaggatcaaaaaacgtttgaattgttatccgcgggagataca
actggaatattccagcttgaatcacaggggatgcgtcaggtgctaaggcgcctgaagccg
tctagtttagaagatatcgtggcggtcaatgccctctatcgtccaggtccaatggaaaat
atcccgctttttatcgaccgaaagcatggcagagtcaaggtctcctatcctcatcctgat
ttgtatgacatattaaaggatacatatggggtcatcgtctatcaggagcaaatcatgctg
attgcagcgaaaatggctggatttcagctgggcgaggcagatctattaagaagagctgtt
tcaaagaaggataaaaaggtccttgatgaagagcgaagccattttgttgaaggatgccta
aaaaaggagtatcctgttaacattgcaaatgacgtttatgacttaatcgtcaaatttgca
aactatggttttaatagaagccatgctgttgcatatagcatgattggctttcagcttgct
tatttaaaagcgcattatccgttatattttatgtgcggtcttttaacgagtgtaattgga
aatgaagacaaaattgctcaatatttctatgaggcgaaggaaaaagggatatctgtgttg
aagccttctattaataagagtgagtttccatttacggttgaaaaaggggagatccgctac
agcttaagagcgatcaaaaatgtcggagtgtcagctgtaaaggatatatacagagcaaga
caggaaaagccgtttgaagatttatttgatttttgcgcaagagtatcaccaaagagtgtc
aaccgaaaaacgattgaagcgctcattttttcaggggcgatggatgagttttatcccaat
cgtgcttcgttattagcatcgatagatatcgcgttagatcacgtgtcatttttaaatcca
gaggatcagctggactttcttggggatacaaccttctccattaagccaaaatatgcggag
atagaagaaatgccgcttgttgatctcctgcaatttgaaaaagaggcactcgggttatat
ttatcaaatcatccagtacaagcgtaccgagaccgcttaagagagaatggtgcagtggaa
atcatcagactttcttcctatattaagcgtaaaatctcaatgggtggtcttttgacaaaa
gtgaaatcgattcggacaaaaaatggacaatcgatggcatttgttacatttggggatgaa
acgggagaaatggaaggcgtcgtctttccagagcaatttagaaagctgtcccccttactt
gaggagggcaacatgctttatgttgaaggcagaatagaggtcagaaatgacagcagtcaa
atcatcgtgcaagaagctgctttgctggaagagatggatgcaaaaagaaaagagtctgtc
tacattcgtgtgaaagaagagaatcatacgcaggagctgctagagcaagtaaaacgaatc
ctttcgatgcacagcggagaagcagatgtctatttgtattatgagaagcaaaaaaagacg
atgagacttccagatgcatacaaagttcatgcagatcatgctgtcattttccagttaaaa
gagctgctcggtgaacaaaacgttgtgattaaatga
DBGET
integrated database retrieval system
