Bacteroides salyersiae: K6V25_01370
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Entry
K6V25_01370 CDS
T08777
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsal
Bacteroides salyersiae
Pathway
bsal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V25_01370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsal03019
]
K6V25_01370 (recQ)
03400 DNA repair and recombination proteins [BR:
bsal03400
]
K6V25_01370 (recQ)
Enzymes [BR:
bsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V25_01370 (recQ)
Messenger RNA biogenesis [BR:
bsal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V25_01370 (recQ)
DNA repair and recombination proteins [BR:
bsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V25_01370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
HTH_40
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UBD65532
LinkDB
All DBs
Position
complement(350219..352399)
Genome browser
AA seq
726 aa
AA seq
DB search
MAGKINLTDQLKQYFGFDKFKGNQEAIIQNLLDGRDTFVLMPTGGGKSLCYQLPSLLMEG
TGIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSLNKGAIDQVKADILAGKTKLLYVAP
ESLTKEENVEFLRSVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPLIALTAT
ATPKVQHDIQKNLGMVDAQIFKSSFNRPNLYYEVRPKTANIDRDIIKFIRNNPEKSGIIY
CLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDK
PDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGRCITFYTNKDLQKLEKFMQGKPVAEQEI
GKQLLLETAAYAESSVCRRKTLLHYFGEEYLEDNCGNCDNCLNPKKQVEAQELLCAVIEA
IIAVKENFKADYIIDILQGRETSEVQAHLHEDLEVFGSGMGEEDKTWNAVIRQALIAGYL
SKDVENYGLLKVTEDGHAFLKKPKSFKITEDNDFEEVEEETPARGGGSCAVDPALYSMLK
DLRKKLSKKLEVPPYVIFQDPSLEAMATIYPVTLEELQNIPGVGAGKAKRYGEEFCKLIK
RHCEENEIERPEDLRVRTVANKSKLKVSIIQAIDRKVALDDIALSKGIEFGELLDEVEAI
VYSGTKLNIDYFLDEIMDEDHMLDIYDYFKESTTDKIDDALDELGDDFAEEEVRLVRIKF
ISEMAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcagggaagattaatttgacagaccagctgaaacagtatttcgggtttgataaattt
aagggaaatcaggaagcgatcattcagaacttgctcgatgggagagacacttttgtgctg
atgcctacgggaggagggaagtctctgtgctatcagttaccttctcttttgatggaaggt
acggggattgttatttctccgttgattgcactgatgaagaaccaagtggatgctatgcgc
aattttagtgaagaagacggtattgcccattttatcaattcttcattaaataaaggtgcg
atagaccaagtgaaggctgatatccttgccggaaaaacaaaattgctatacgtagctccg
gaatcattgacgaaagaagagaatgttgaatttctgcgatcggttaagatttcgttctat
gcagtagatgaggctcactgtatttcggaatgggggcatgacttccgtccggaatatcgg
cgaatacgtcccattattaatgaaatagggaaggcgcctcttatagcacttactgctacg
gcaactccgaaggtacaacatgatattcagaaaaatctgggcatggttgatgcgcaaata
tttaagtcgtcatttaatcgtccgaacttgtattatgaggtacgtcctaaaactgcaaat
atcgacagggatatcattaagtttattcggaataatccggagaagtccggtattatttat
tgtctgagccgtaagaaggtggaggaacttgctgaaatacttcaagctaacggtattaat
gcaagggcatatcatgcaggaatggattctgctacgagaactcagaatcaggatgatttt
ctgatggagaagatcgatgtgattgtggcaaccattgcttttggtatgggtattgataaa
ccggatgtgaggtacgtaatacattacgatataccgaaaagcctggaaggatattatcaa
gagacaggacgtgccggcagagacggtggtgaaggccggtgtattaccttttatacaaac
aaggacctgcagaaactggaaaagttcatgcagggaaagccagtggcagagcaggaaata
ggtaagcagcttttattggagactgctgcatatgccgaatcatctgtttgccgtcgtaag
actttattgcattacttcggtgaggagtatttggaagataattgtggaaattgtgacaac
tgtttaaaccctaaaaaacaagtggaggctcaagaattattgtgtgctgtgattgaagcg
atcatagcggtaaaagaaaactttaaagcagattatataatagatattttacagggaagg
gaaacttccgaagtacaggcacatttacacgaagatttggaagtgttcggttccggtatg
ggagaggaagataagacttggaatgccgtgatccgtcaagcgttgatagccggatatctg
agcaaggatgtggagaattatggcctgttgaaagtaacagaggatggacacgcattcttg
aagaaaccaaagtcattcaagataaccgaagacaacgacttcgaagaagtagaggaagaa
actccggcccgtggtggaggatcttgtgcggtagaccctgcgctttattctatgcttaag
gatttgagaaagaagctgtcaaagaaactggaggtaccgccttatgtgatttttcaggat
ccttctttagaagcgatggctacgatttatccggtgacgcttgaagaattacagaatatt
ccgggagtcggtgcaggaaaggccaaacgttatggtgaagagttctgtaagctgattaag
cgtcattgcgaggaaaacgagattgaacgtcccgaagatttgcgtgtacgtacggtagcc
aataaatctaagttaaaagtttctattatccaagctatcgaccgtaaagtagctttggac
gatatcgcattgtcaaaaggaatagaattcggagaattattggatgaggtagaagcaatc
gtttattcgggtacaaaactgaatatagattatttccttgatgaaattatggatgaggat
catatgcttgatatctatgattatttcaaagaatcaactaccgataagatagatgatgcg
ctcgatgagttgggtgatgattttgcggaagaagaggttcgcttggttcgtattaaattt
atatcagaaatggctaattaa
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