Bacteroides salyersiae: K6V25_01870
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Entry
K6V25_01870 CDS
T08777
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bsal
Bacteroides salyersiae
Pathway
bsal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6V25_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsal03021
]
K6V25_01870
03400 DNA repair and recombination proteins [BR:
bsal03400
]
K6V25_01870
Enzymes [BR:
bsal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6V25_01870
Transcription machinery [BR:
bsal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K6V25_01870
DNA repair and recombination proteins [BR:
bsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K6V25_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
SAM_EPH
NPL
Motif
Other DBs
NCBI-ProteinID:
UBD65615
LinkDB
All DBs
Position
complement(478871..479863)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADSRFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAITTIRID
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFESEKVSITVENSSEFRAGDIGKYLT
GFEVLNPELVICHLDSKSTMQIDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYAVENFRVEQKTDYEKLILEIATDGSIHPKEALKEAAKILIYHFMLFSDEKITLENNDV
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaagcggattctaga
ttcggtaagttcgaatttcgtccgttggaacccggttttggtattactgtaggtaatgca
ttacgccgtatcctcctttcttcattagagggttttgccattaccactattcgcatagat
ggtgttgagcatgaattttctagtgttcctggagtaaaagaggatgttaccaacattatc
ttgaatctgaagcaagttaggttcaagcaagtagttgaagaattcgaaagtgagaaagtg
agtatcacggtggagaattcaagtgaatttagagcaggtgacataggtaaatatttgact
ggatttgaagtgttaaatccggaattagttatttgtcatttagattctaagtcaactatg
cagattgatattacaatcaataagggtcgtggttatgtccccgctgatgaaaaccgcgaa
tattgtactgatgtgaatgtaattccaatcgactctatttatacgccgatacgtaatgtg
aagtatgctgtagaaaacttccgtgtagaacagaagactgactatgaaaagctgatactt
gagattgctacggacggttccattcatccgaaggaagcactgaaagaagctgctaaaatt
ttgatttatcatttcatgttattctcagacgaaaagattactcttgagaataatgatgtg
gatggtaacgaagaatttgatgaggaagttctgcatatgcgtcaattgttgaaaactaaa
cttgttgatatggacttatcagttcgtgctctcaattgcttgaaggctgctgatgtagaa
actcttggcgatttagtgcagttcaacaaaactgatttgctgaaattcagaaacttcgga
aagaaatcgcttaccgagcttgatgatttgctggaaagtctgaatctgtcgtttggaacc
gacatttctaaatataaattagataaagaataa
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