Bacteroides salyersiae: K6V25_02910
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Entry
K6V25_02910 CDS
T08777
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsal
Bacteroides salyersiae
Brite
KEGG Orthology (KO) [BR:
bsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsal03032
]
K6V25_02910 (topA)
03400 DNA repair and recombination proteins [BR:
bsal03400
]
K6V25_02910 (topA)
Enzymes [BR:
bsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6V25_02910 (topA)
DNA replication proteins [BR:
bsal03032
]
Prokaryotic type
DNA Topoisomerases
K6V25_02910 (topA)
DNA repair and recombination proteins [BR:
bsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6V25_02910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DNA_pol3_delta2
EF_EFCAB10_C
Motif
Other DBs
NCBI-ProteinID:
UBD65803
LinkDB
All DBs
Position
707792..710137
Genome browser
AA seq
781 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDIDKNFKPNYEIPADK
KELVTKLQAEAQKADVVWLASDEDREGEAIAWHLYEVLKLKPEQTRRIVFHEITKNAILK
AIENPREIDINLVNAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EIQAFKSEASYRVIAIFLVPDTDGKLTEMKAELAHRLKTKEEAKAFLESCKDAIFTIEDI
TKRPIKKSPAAPFTTSTLQQEAARKLGYTVAQTMMLAQKLYEAGLITYMRTDSVNLSEYA
TEGSKQAIINMMGEQYVHPRHFTTKTKGAQEAHEAIRPTYMENSTVEVPSQEKRLYDLIW
KRTIASQMAEAELEKTTATIGISTNDDVFTATGEVITFDGFLRVYKESYDDENEQEDESH
LLPPLKKGQVLEHNDIVATERFTQRPPRYTEASLVRKLEELGIGRPSTYAPTISTIQQRE
YVEKGDKAGEERSFNILTLKGQNISDAIHTEIVGAEKSKLLPTDIGTVVNDFLNEYFSNI
LDYNFTANIEKEFDEVADGEKQWTAIMKHFYKGFHPSVESTLATKTEHKVGERILGEEPG
TGKVVSVKIGRFGPVVQVGSTDSEEKPRFARLEKGLSMETITLQEALDLFKLPRVVGEYE
DKEVSIGTGRFGPYVRHDGKYISLPKTLDPMAITLEEAIELITEKRATEAKRHIKQFAEE
PELEILNGRYGPYISYKGSNYKIPKDVVPADLNLKTCLEIIKLQSEKAASTPKKGRTAKK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaccttgttattgtcgagtctccagcaaaagcaaaaaccattgaaaaattt
ctggggaaagatttcaaagtactctccagctatggtcatatcagagacttgaagaagaaa
gagttcagtatcgatatcgataaaaacttcaagcccaattatgaaataccggcagacaag
aaagagttggtaacaaaactacaggcagaagcccagaaagcagacgttgtatggttagca
tccgatgaggaccgcgaaggagaagccatcgcctggcatctttatgaggtattgaaacta
aaaccggaacagacccggagaatcgtctttcatgaaatcaccaagaatgccatattaaaa
gccatcgagaatccacgcgaaatcgatatcaacctggtcaatgcacaacaggcacgacgc
atcctcgaccgtatcgttggtttcgaactttctccagtattgtggaagaaagtcaaaccg
gctctttccgccggacgtgttcaatcagtagccgtacggctaattgtagagcgggaacgg
gaaatacaggcattcaagagcgaagcgtcttatcgcgttatcgccatattcctcgtaccg
gacactgacggtaaactgacagaaatgaaagcggaactggctcatcgccttaagacaaaa
gaagaagccaaagcatttttggaaagttgcaaagatgctatattcacaatcgaagatatt
accaaacgcccgataaagaaaagcccggccgcaccattcacaacctcgactctgcaacag
gaagcggcccgcaaattggggtatacagtggcacaaaccatgatgttggcacaaaaatta
tacgaagccggattaatcacttatatgcgtaccgattcggtcaacttgtcggaatatgca
actgaaggtagcaaacaggctatcatcaacatgatgggagaacaatacgtgcatccgcgc
cactttaccaccaaaaccaaaggtgcacaagaagcgcatgaggccatccgtcctacctat
atggaaaactccaccgtagaagtaccctcacaggaaaaaagattgtacgacctgatctgg
aaacgtaccatcgcttcacaaatggcagaagccgaactggaaaagacaactgcaaccatc
ggtatcagtaccaatgatgatgtgtttacagcaaccggagaagttattactttcgacggt
ttccttcgcgtatataaagaatcgtatgacgacgaaaacgaacaggaagatgaaagccat
ctgcttcctccattgaaaaaaggacaggtgctcgagcacaatgatattgtcgctaccgaa
cgtttcacccaacgtccgccgcgttacacagaagccagtctcgtacgcaaacttgaagaa
ttaggtatcggccgtccttccacatatgctcctactatctctactatccagcaacgcgag
tatgtagagaaaggagacaaagcaggtgaggaacgctctttcaatatactgacactaaaa
ggccaaaatataagtgatgccatacataccgaaatagtaggagcagaaaaatcaaaatta
ctgcctaccgatatcggaacggtagtgaatgacttcctgaacgaatatttctcaaatatt
ctggactacaactttacggctaatatcgaaaaagagtttgacgaggtagcagacggagag
aaacaatggacagcaatcatgaaacacttctataaaggattccatccttcggtagagtcg
acattagctactaaaacagaacataaagtaggtgaacgtattctgggtgaagaaccggga
accgggaaggtagtatcggtcaaaatcggacgctttggacctgtcgtacaagtcggcagt
acggattcggaagaaaagccccgttttgcacgtttggagaagggcctgtcaatggaaacg
atcactcttcaggaagcattggacttgtttaaacttccgcgtgtcgttggcgaatacgag
gataaagaagtaagcataggtacaggacgctttggaccgtacgtacgccatgacggtaaa
tacatatctctgcctaagacactcgatccgatggccattacgcttgaagaagccatcgaa
cttatcacagagaagagagccacagaggccaaacgccacatcaagcaattcgccgaagaa
ccggaactggaaatactgaacggaagatacggaccatatatctcttataaaggaagtaac
tataaaatccctaaagatgtggttcccgcagatttgaatctgaaaacttgtttggagatt
atcaagctgcaaagcgaaaaagcagcgtccactcctaaaaagggacggacagcaaaaaag
aaataa
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