Bacteroides salyersiae: K6V25_09920
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Entry
K6V25_09920 CDS
T08777
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bsal
Bacteroides salyersiae
Pathway
bsal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V25_09920 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsal03019
]
K6V25_09920 (rny)
Messenger RNA biogenesis [BR:
bsal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6V25_09920 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
UBD63304
LinkDB
All DBs
Position
complement(2715758..2717293)
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AA seq
511 aa
AA seq
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MLVTIVASIACFIVGGILSYVLFKYGLKARYDNILKEAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVAQRNQKIQQAENKLKQREMVLSQRQEEIQRKKAEADAVRENLEAQLGIVDRK
KEELDKLQQQEIEKLETISGLSAEEAKERLVESLKEEAKTQAQSYINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREVARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKFKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAQKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttagtaacaatagtagcatccattgcttgcttcatcgtaggtggcatattgtcatac
gtattatttaaatacggactgaaagccagatacgacaatatcctcaaagaagcggagaca
gaagcagaagtaatcaagaaaaacaaattgctggaggttaaggaaaaattcctcaataag
aaagcagatctggaaaaagaggtagcccagcgtaaccagaaaattcagcaagctgaaaac
aaactgaaacaacgcgaaatggtattaagccagcgccaggaagagattcaacgcaaaaag
gcggaagctgatgccgtaagagaaaatcttgaagcccaattgggaatcgttgacagaaag
aaagaagaactggacaaactgcaacagcaggagatagaaaaactggaaacaatctccggt
ttatctgccgaagaagcgaaagaacgcctggtagaatcattgaaagaggaagccaagaca
caggcacagtcgtacatcaacgatatcatggacgatgcgaaactgacggccagcaaagaa
gccaaacgaatcgtaatacaatcgatccaaagagtagcgacagagacagctattgaaaat
tccgtaaccgtattccatattgagtccgatgaaatcaaaggacgcatcatcggtcgtgaa
ggccgtaatatccgtgctctggaagcggctaccggtgtagaaatcgttgtagacgatact
ccggaagcaatcgttctttccgcattcgatcctgtacgtcgcgaagtggctcgtctggcc
ctgcatcaattggtaacggacggacgtattcacccggcacgtattgaggaagtggtagcc
aaagtgcgcaaacaagtagaagaagaaatcatagaaaccggtaaacgtactaccatcgac
ttgggcattcacggattgcatccggaactgattcgtatcatcggtaagatgaaataccgc
tcttcctatggccagaacctgttgcaacatgctcgtgaaacggccaatctctgtgctgtg
atggcatcggaattaggtttgaatccgaaaaaggcaaaacgcgccggactgttgcacgat
attggtaaagtgcctgatgaggaaccggaattgccgcacgcattattgggtatgaagctg
gcagagaaattcaaagaaaagccggatatctgcaatgccatcggtgcccaccatgacgaa
acggaaatgacaagtcttctcgctcctatcgtacaggtatgtgatgctatctccggagca
cgtccgggagcacgccgcgaaatcgtagaagcgtatatcaagcgtctgaacgatctggag
cagttggccatgtcttatccgggcgtaacaaaaacttatgccatccaagccggacgtgag
ttgcgcgttatcgtaggtgcagacaagatagatgataagcaaacggaaagcctgtcgggc
gaaatcgctcaaaagatacaggatgaaatgacttatccgggccaggtgaagattaccgta
atccgtgaaacacgtgcagtaagctttgctaaataa
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