Bacteroides salyersiae: K6V25_10120
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Entry
K6V25_10120 CDS
T08777
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bsal
Bacteroides salyersiae
Pathway
bsal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6V25_10120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsal03400
]
K6V25_10120
Enzymes [BR:
bsal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K6V25_10120
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K6V25_10120
DNA repair and recombination proteins [BR:
bsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K6V25_10120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UBD63341
LinkDB
All DBs
Position
complement(2760009..2760848)
Genome browser
AA seq
279 aa
AA seq
DB search
MIEAPEACCLSEQLNRTVRGKRITNVFAQYTPHKFAWFYGNPEEYPERLTGKTIDKINPC
GGMIEIEAGDMMLILTDGINLRYFTPGEKLPARHQLLIGFEDESCLVASVRMYGGLWCFP
KEGFNAPIAAYYETAKNKPQVMTDEFCESYFRKLIYADEAQKKTTKAFLATEQTIPGLGN
GVLQDILYNARIHPKTRIHSLSAGQKEELYHQIKSTLQEMYNLGGRSTETDLFGKSGGYI
PHLSKNTAGTICPRCEDMIKKENYLGGSIYYCSGCQPIQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcgcccgaagcctgctgcctgtcagaacaactgaacagaacggtcagagga
aagagaattactaacgtattcgcacagtataccccccataaattcgcctggttttatggt
aatccggaagaataccccgaacggttgaccggaaaaaccatcgataagataaatccctgc
ggcggtatgattgaaatcgaagccggtgatatgatgcttatccttaccgatggtatcaac
ctgcgttactttactcccggtgaaaaattaccggccaggcatcaattgcttatcggattt
gaggatgagagttgccttgttgcttccgtacggatgtatggaggtttatggtgttttccg
aaagaaggattcaatgcgcccatagcggcttattacgagacagccaagaataagccgcaa
gtaatgacggatgagttctgtgagtcgtatttcagaaaattaatttatgcggatgaggca
caaaagaaaacaacaaaagcttttctggcaaccgaacagaccatcccgggattgggtaac
ggagtgctacaggatatcctgtacaatgcccgcattcatccgaaaacgcgaatccattcc
ttgtctgccggacaaaaggaggaactctatcaccagataaaatccactcttcaagagatg
tataacttgggagggcgcagcacagagaccgatctctttggcaaaagcggaggatatata
ccgcatctctctaaaaatacagccggcacaatctgtcctcgttgcgaagatatgataaag
aaagaaaactatctgggtggcagcatttattattgtagcggttgccaaccgattcaataa
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