Bacterioplanes sanyensis: CHH28_01430
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Entry
CHH28_01430 CDS
T04982
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bsan
Bacterioplanes sanyensis
Pathway
bsan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsan00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHH28_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsan03021
]
CHH28_01430
Transcription machinery [BR:
bsan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHH28_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
Motif
Other DBs
NCBI-ProteinID:
ASP37422
UniProt:
A0A222FFL2
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All DBs
Position
304115..306040
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AA seq
641 aa
AA seq
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MTGHQSGTILRHGWPKERLKVILPRFSAPHNTEHRASMSANTQQSRLKELIAKGKEQGYL
TFAQVNDHLPDDIANPDQVEDIIRMINDIGIPVSENAPDGESLFNEAADDAAAEEAAAAL
ASVESDVGRTTDPVRMYMREMGTVELLTREGEIVIAKRIEEGIREVMSALAYYPGAVSVV
LNAFQEAEEDPNRVSDIFSGFIDPSDETPEPGPQSGPDAETDDNIGDDDDDSDEEEDSGI
DLTEVIRRFDEIKDAHIAAEAALEKHGRASKQAEEALALLAERFAPIKLTPKYFDQLVSQ
AREALDQVRAQERQIMVMMTRKCGMDRKEFIGNFPGNEVNNQWIEELIAGGHKYSDKLDT
YKLEIFRAQKKIKAVEDRVGLVIPDIKEVNRRVSIGEARARRAKKEMVEANLRLVISIAK
KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRI
PVHMIETINKLNRISRQMLQEMGREPTPEELAERMDMPEDKIRKVLKIAKEPISMETPIG
DDEDSHLGDFIEDTQSESPLDTATTEGLTDATRSVLAGLTAREAKVLRMRFGIDMNTDHT
LEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDHLRSFIDE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacagggcatcagtcgggaacaatcctccggcacggctggcctaaagagcggttaaaa
gttatactcccgcgcttttctgcgcctcacaatacggaacacagggcttctatgtcagcg
aacacccaacaatcccgtttgaaagaacttattgctaaaggtaaggagcaaggctacctc
acttttgcacaggtgaatgaccacctgccggacgatattgccaacccggatcaagttgaa
gacatcatccgtatgatcaacgacatcggtattccggtgtccgaaaacgcccctgatggc
gagtccctgtttaatgaagccgcggatgacgctgctgctgaagaagccgcagccgcgctg
gcatcggttgaatcggacgtaggccgtaccaccgacccagtgcgtatgtacatgcgtgaa
atgggtaccgttgaactgctgacacgcgaaggcgaaattgttatcgccaagcgcattgaa
gaaggcatccgtgaagtgatgtctgccctggcctactacccaggcgccgtaagcgtggtc
ctgaatgccttccaggaagcagaagaagacccgaatcgtgtgagcgacatctttagtggc
tttatcgacccgtccgatgaaacaccagagccaggtccacaatcgggaccagatgcggaa
acagacgacaacatcggcgatgacgatgacgactcggacgaagaagaagacagcggcatt
gacctgaccgaggtcatccgtcgcttcgatgagatcaaagacgctcacattgccgctgaa
gccgcgctggaaaaacacggccgtgcaagcaagcaagcggaagaagccttggcgctgttg
gccgagcgctttgccccgatcaagctgacgcccaaatactttgaccagctggtgagccaa
gcacgcgaagcgctggatcaagtgcgtgcgcaagagcgccaaatcatggtgatgatgacg
cgcaaatgcggcatggaccgcaaagaatttatcggcaatttccctggtaacgaagtgaac
aaccagtggattgaagagctgatcgctggcggtcacaaatactcagacaaactcgatact
tacaagctggaaattttccgcgcgcagaagaaaatcaaagccgtcgaagatcgtgttggc
ctggttattccagacattaaagaagttaaccgtcgcgtttccatcggtgaagcccgtgct
cgtcgcgcgaaaaaagaaatggtggaagctaacctgcgtctggtgatttcgatcgctaag
aaatacaccaaccgtggtttgcagttcctggatttgattcaggaaggcaacatcggcttg
atgaaagcggtggataagttcgaataccgtcgcggttataagttctcgacctacgccact
tggtggattcgtcaggccatcacgcgctccattgctgaccaagcgcgcaccattcgtatt
ccggtgcacatgatcgaaaccatcaacaagctgaaccgtatctcacggcaaatgctgcag
gagatgggccgtgagccgacgccagaagaattggcagagcgcatggatatgccagaagac
aaaattcgcaaagtgctgaaaatcgccaaagagccgatttcgatggaaacgccaatcggc
gacgacgaagattcgcacctgggcgactttatcgaggacactcagtctgagtcgccactc
gataccgccaccaccgaaggtctgacggatgccactcgctcagtattagctggccttaca
gcgcgcgaagccaaggttttgcgtatgcgtttcggcatcgatatgaacaccgaccacacg
ttggaagaagtgggcaaacagtttgatgttacgcgtgagcgtatccgtcagattgaggcc
aaagcgctgcgcaaactgcgccacccaagccgctctgaccacttgcgaagctttatcgac
gaataa
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