Bacterioplanes sanyensis: CHH28_11830
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Entry
CHH28_11830 CDS
T04982
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bsan
Bacterioplanes sanyensis
Pathway
bsan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHH28_11830 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsan03400
]
CHH28_11830 (recD)
Enzymes [BR:
bsan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CHH28_11830 (recD)
DNA repair and recombination proteins [BR:
bsan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CHH28_11830 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_28
nSTAND3
DEAD
UvrD_C
NTPase_1
PhoH
TrwB_AAD_bind
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ASP39323
UniProt:
A0A222FM71
LinkDB
All DBs
Position
2542457..2544817
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AA seq
786 aa
AA seq
DB search
MERERAVSDSQLSFSFDQSEPLSESDVAELLSAWQQAQWLRPLDCSFAQLIVELEKEQGR
GVEPLVLLLAALTSYQVGRGHVCIDLAALVNDSRQALALSPDEERSWQTLETQTLPQHAL
AHLSLNDCLEALQRSVAVSDGSEVTPLVLQGQRLYLRRLWRYEQTIAANIAARLSARAEL
LSADSEQAVTLSQALAQLFEFHSATDYQKLACALAARSRFAVITGGPGTGKTTTVVKLLA
ALQALAAVHRGQPYRIRLAAPTGKAAARLNESIAAAVGKLPLSLLPGPPARNDIPTQVTT
VHRLLGSRPNSRHFRHHSGHPLPLDILVVDEASMVDVDLMAALLDALPDTAQLILLGDKD
QLASVDAGAVLGELCARATEGHYTHETASWLQQVCQQPVPASLRDDSGRALDQVVAMLRV
SYRFQQDSGIRELAQAVNERALTEPLLTACRNSDFADVCWLHTENSDAALQQLALHAVDG
SAARFANVGRGRVLHDQPLPPPCGYRHYLQQIKDCSLTEKCAEPLWQQWAAGVLEAFSEF
QILCAVRQGPWGVEGVNQLVAEQLRQSNLIERSDGWYPGRPVLVTANDYNLGLMNGDIGI
TLRVPLGRTPDGGIEWVLRVAFPAAQDRSAKETAAKETAAKETAVNEDVAQRSAGQSQRV
RWVSPSRLQQLETVFAMTVHKSQGSEFNHTCLVLPDRMSPVLTKELLYTGITRAKNWFSF
LTPNEALLPDIAQQAVTRVSGLREGLEQQQVVDDKSNCWKKRWLKEAIDATSNELKPRPG
SQGEGA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
attgagcgggagcgagctgtgagcgactcgcaattatccttcagttttgatcaaagtgag
ccactgagtgaatcggacgtagccgagctgctctctgcgtggcagcaggcacagtggctg
aggccattggattgcagctttgcgcagttaattgttgagctggaaaaagaacaggggcgc
ggcgtcgagcctttggtgttgttattggcagcgctcacgtcttatcaggtcgggcgcggg
catgtatgcatcgatttggcggccttggtgaatgactcgcgccaggcgttggcgttgtcg
cctgatgaagaacgcagttggcaaactcttgagacacaaacactgccgcaacatgcgttg
gcgcatctgtcattaaacgattgtttagaggcgttgcagcgctcggtcgcggtcagtgat
ggcagcgaagtgacacctttggtgttgcaagggcagcgcttatatctgcgccgtttatgg
cgctatgagcaaactatcgctgccaatatcgctgcacgattgtcggctcgggcggaactg
ctcagtgcagacagtgagcaggcggtgaccttgtcgcaggccctagcgcagttatttgaa
tttcactcggcgacggactatcaaaaactggcgtgcgcattggcggctcgcagccgcttt
gcggtgatcactggcgggccggggactggcaaaaccaccaccgtggtcaaattgttagcg
gctttgcaggcgttggcagcggtgcatcgcggtcagccttatcgcattcgcctagcggca
ccaacgggcaaagccgctgcccggctgaatgaatccattgctgccgcggtcggtaaattg
ccgttgtcattattgccgggcccacctgcgaggaacgacatcccgacgcaggtcaccacc
gtacatcgtttgttaggcagccgacctaatagccgccattttcgccaccacagtgggcat
cctttgccgttggatattttggtggttgatgaggcctccatggtggatgtggacttgatg
gcggctctgctggacgcattgccagacacagcgcagctgattttattgggtgacaaagat
cagctggcgtcggtggacgccggcgcggtattgggagagctgtgtgcccgcgccaccgaa
gggcattacacccacgagacagccagctggctacagcaggtgtgtcagcaaccggtacca
gcatcgctgcgggatgattccggccgtgcattggaccaagttgtagccatgttgcgcgtg
agttatcgctttcagcaagacagtggcattcgtgagttggcccaagcagtgaatgagcgg
gcgctgacagagccattgctcacagcctgtcgcaactctgatttcgccgacgtttgctgg
ctgcatacggagaacagtgacgctgcgctgcagcagctggctctgcacgcggtggatggc
agcgccgctcggtttgccaatgtaggccgcgggcgggtattgcatgaccagccgctacca
ccaccctgtggctatcgccattatttgcagcagataaaggactgttcgctgacagaaaaa
tgcgctgagccgctttggcaacaatgggctgctggggtattggaggcattttctgaattt
cagattttgtgtgcggtgcgccaaggcccttggggcgtagagggagtcaatcaactggtg
gcggagcagttgcggcaaagtaatttgattgagcgcagcgatggctggtatccaggacgc
cccgtgttggtcacggcaaacgactataaccttgggctgatgaacggcgatattggcatt
accttacgtgttccgctggggcgcacacccgatggtggaattgaatgggtgttgcgggtg
gcttttcctgcggcgcaggacagatcagcgaaagaaacagctgcgaaagaaacagcggca
aaagaaacagcagtaaatgaagacgttgcacaacggagcgctggtcaaagccagcgcgta
cgttgggtgtcgcccagccggttgcagcaattagaaacggtgttcgccatgacggtgcac
aagtcgcaaggctcggagtttaaccatacttgcttagttttgccggatcgcatgagtccg
gtactcaccaaagaactgctgtacacaggtattacccgagcaaaaaactggtttagtttt
ttaaccccaaatgaggcgctattgcctgatatcgctcagcaagcggttactcgtgtgtcc
ggattgcgcgagggtcttgagcagcaacaagtggtagatgacaaaagcaattgttggaag
aagcgatggttgaaagaagcgattgacgcaacgagcaatgagttgaaaccgcgccctggc
tcacaaggagagggcgcgtga
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