Brachybacterium saurashtrense: DWV08_00400
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Entry
DWV08_00400 CDS
T05573
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bsau
Brachybacterium saurashtrense
Brite
KEGG Orthology (KO) [BR:
bsau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsau03400
]
DWV08_00400
Enzymes [BR:
bsau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWV08_00400
DNA repair and recombination proteins [BR:
bsau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DWV08_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXK44235
UniProt:
A0A345YJY3
LinkDB
All DBs
Position
complement(86896..89580)
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AA seq
894 aa
AA seq
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MRIEFGWSLDGAAWADGGGARGAARMGPRALVQLLQNRLGLTRPPVEQAVRVAEYSRALA
AAAPAWVRDSAAADPWATTAALLRWRDAAVEAGARLVPRDGLPERIAALCAIEARHSAAR
PGAADDLRELVDVLEQEVTWPLGLEVLVCHEPPEELPGLWPRLLSLLERAGVRREPAEAA
GGRSPALLLVEAEDEWAAAETAARFLAGRDGAPLQVLAGADTVLLDQELHRRGLPALGVA
APAAHRTALQILPLFLSVALAPVDVQQLAALLDLRVLDAPEGGREHVGLVPARARARLLD
ALAQEPGIGGAHWRRALAAIAADKGMAAGGREFVAALAALVAAPIPPEALTPPRVREATD
ALGARLRALGQGAPELTRASQHLQVLREVLDTLEDSRVLGTRELAQMVEAAGGRAASPFA
RPEASAAWRTCSRPAQLLPRGGDVLWWGADRDDAATGVVWDAAEAEALTALGARILPPAR
LAALATDAGLRGLHGAERLVVVRTRRRAEEAVAPHALLAHLAAARAEPGQGVAEVLAAHT
LAPERTLGEDGFDLAGSRRPLEVPPRARPRPLPRDLTRRVKPAPHLVPARLSYSQAEDLL
GCRQKWTYKNGLQIRPASIAQVPTGNRMIGTLVHAVVEALAQREDRTGPPGAQRVREEID
AQVPRLASELLLPGREVELAGMREQAVRSLVEFFDRLAAAGLVITAVESRFEEALTLPLR
RGEVTVPFVGFRDVDAEDADGRPVVIDLKWTFAAKKYPDLFETGEALQLAAYARPLHDRH
VDVGYYLLAQGEFVAANPALDPHGRPTLDVVDLWRRGVDGMTAALDAIGDGEVDARSGQI
LRDAGQDLATPRTAAKTTYERAREAARAEGALVVDARCDYCEFSLLCGMRGDAS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgagttcggctggtcgctcgacggcgccgcctgggccgacgggggcggcgcc
cggggcgcggcgcggatggggccgcgcgcgctggtgcagctgctgcagaaccggctgggc
ctgacccggccgcccgtggagcaggcggtgcgcgtggcggagtactcccgcgccctggcc
gccgccgctcctgcctgggtgcgggactccgccgccgcggacccgtgggcgaccacggcc
gcgctgctgcggtggcgggacgccgcggtcgaggcgggcgcccggctggtcccccgcgac
gggctcccggagcggatcgcggcgctgtgcgcgatcgaggcccggcactccgcggcccgg
cccggcgcggcggacgacctgcgcgagctggtggacgtgctcgagcaggaggtcacctgg
ccgctgggcctcgaggtgctggtgtgccacgagcccccggaggagctgcccggcctgtgg
ccgcgcctgctgtccctgttggagcgggccggggtgcggcgcgagcccgccgaggccgcg
ggcgggcgctcccccgcgctgctgctcgtggaggcggaggacgaatgggccgcggccgag
accgccgcccggttcctcgccggccgtgacggcgcaccgctgcaggtgctcgccggggcg
gacaccgtgctgctggaccaggagctgcaccgccgcggcctgcccgccctcggcgtcgcc
gcaccggccgcgcaccgcacggccctgcagatcctgccgctgttcctctccgtcgccctc
gccccggtggacgtgcagcagctcgccgccctgctcgatctgcgcgtgctggacgccccg
gagggcgggcgggagcacgtgggcctcgtccccgcccgtgcccgggcccggctgctggac
gccctcgcgcaggagcccggcatcggcggggcgcactggcggcgggcgctggcggcgatc
gcggccgacaaggggatggcggccggcgggcgcgagttcgtcgccgcgctcgccgccctg
gtcgccgccccgatcccgccggaggcgctgaccccgccgcgggtgcgggaggcgaccgac
gcgctgggcgcgcggctgcgggccctcgggcagggcgcgccggagctcacccgggcctcg
cagcacctgcaggtgctgcgggaggtgctcgacaccctcgaggactcccgcgtgctcggc
acccgcgagctggcgcagatggtcgaggccgcgggcggccgggcggcctcccccttcgcc
cgcccggaggcgagcgccgcctggcgcacctgcagccggcccgcccagctgctgccgcgc
ggcggggacgtgctgtggtggggcgccgaccgcgacgacgccgccaccggcgtggtgtgg
gacgcggcggaggcggaggcgctcaccgcgctcggtgcccggatcctcccgcccgcgcgc
ctggcggcgctggccacggatgccgggctgcgaggcctgcacggggcggagcggctcgtg
gtggtgcgcacacggcgccgtgccgaggaggccgtcgcaccgcacgccctgctcgcccac
ctcgccgccgcacgggccgagcccgggcagggcgtggccgaggtcctggccgcgcacacc
ctcgccccggagcggaccctcggcgaggacggcttcgacctcgccggatcccgtcggccg
ctcgaggtgccgccccgcgcacggccgcgccccctgccccgggatctcacccggcgggtc
aaacccgccccgcacctggtcccggcacggctgtcctactcccaggcggaggacctcctg
ggctgccggcagaagtggacgtacaagaacggcctgcagatccggccggcgtcgatcgcg
caggtccccaccggcaaccgcatgatcggcacgctggtgcacgcggtggtggaggcgctg
gcgcagcgcgaggaccgcaccggcccgcccggggcgcagcgggtccgggaggagatcgac
gcgcaggtgccgcgcctggcctccgagctgctgctgcccgggcgggaggtggagctggcc
gggatgcgggagcaggccgtgcgctcgctggtggagttcttcgaccggctggccgcggcg
ggcctggtgatcacggcggtggagtcccgcttcgaggaggcgctcacgctgcctctgcgc
cgcggggaggtgaccgtgccgttcgtgggcttccgggacgtggacgcggaggatgcggac
ggccggcccgtggtgatcgacctgaagtggaccttcgccgcgaagaagtacccggacctg
ttcgagaccggggaggcgctgcagctggcggcctacgcccggcccctgcacgaccgccac
gtggacgtgggctactacctgctggcccagggcgagttcgtggcggcgaaccccgcgctg
gacccgcacggccggcccaccctggacgtggtggacctgtggcggcgcggcgtggacggc
atgacggcggcgctggacgcgatcggcgacggcgaggtcgacgcccgcagcggccagatc
ctgcgggacgccgggcaggacctggccacgccccgcaccgcggcgaagacgacctacgaa
cgggcgcgggaggccgcgcgcgccgagggcgcgctggtggtcgatgcgcgctgcgactac
tgcgagttctcgctgctgtgcgggatgagaggcgatgcgtcatga
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