Brachybacterium saurashtrense: DWV08_09450
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Entry
DWV08_09450 CDS
T05573
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bsau
Brachybacterium saurashtrense
Pathway
bsau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DWV08_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsau03021
]
DWV08_09450
03400 DNA repair and recombination proteins [BR:
bsau03400
]
DWV08_09450
Enzymes [BR:
bsau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DWV08_09450
Transcription machinery [BR:
bsau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DWV08_09450
DNA repair and recombination proteins [BR:
bsau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DWV08_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AXK45810
UniProt:
A0A345YPF8
LinkDB
All DBs
Position
complement(2064870..2068754)
Genome browser
AA seq
1294 aa
AA seq
DB search
MIDVNTFDELRIGLATADDIRGWSHGEVKKPETINYRTLKPEMDGLFCERIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTKSSVRRERMGHVELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYMVTYVDEQARHDDMPDLQARFDLEVKELENERDAAINDRALSAEKD
LAQLEEEGAKADAKRKVRDSGEREQAQIRKKYDAEIERITRIWERFKTLKVADLEGDEQL
YRAMKLRYGTYFEGGMGAEALQRRLADFDLEAEAASLREVIATGKGQKKARALKRLKVVS
AFLSTTNSPVGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQESVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVNGPQLSLHQCGLPKGMALELFKPFVMKRLVELSHAQNVKAAKRMVERAR
PEVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPAQDMIIGLYHLTTVREETAGSGR
SFASVAEAVMAFDRGELHLNAPVSLRFTDIAPPSDWEAPEGWTEGDPIILTTTLGTVYFN
ETLPVDFPFVQGQVGKKRLGGIVNALAERYDKGQVAASLDALKAYGFSWSTRSGASFALS
DVVTPPGKAEIIERFEGKAAQVQENRDLGLISESERNAELIDIWTEATNEVDQAMRENFE
PTNTIYRMVDSGARGNWMQIRQIAGMRGLVTNPKGEIIARPILSNYKEGLSVLEYFIASH
GSRKGLADTALKTAQSGYLTRRLVDVSQDVIVREDDCGTTKGLQLPIAVEEAGALRTHEH
AESTVYGRVLATAAIGADGSEAAPAGTELGDVVIEQLVAAGVRQVKIRSVLTCDSAVGTC
AQCYGKSLATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTFHSGGVASADGDITHGLPRVQ
ELFEARTPAGFAPISEFSGRAEIEENDKQRKITVTPDDGSDPVSYTVSKRVTLLIGDGDH
IEVGQQLTQGSVDPKQVLRILGPRAVQQHLVDEVQKVYISQGVDIHAKHIEVIVRQMLRR
ITVIESGDTGLLPGDFAERVTFERENRRVLSEGGQPASGRPELMGITKASLATESWLSAA
SFQETTRVLTEAALNRKSDQLMGLKENVIIGKLIPAGTGLARFRHIAVEPTDEAKAQMYQ
VPGYDELDFSGFGQTGAVNLDDIDYADPFRTDFR
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgtcaacaccttcgacgagctgcgcatcggcctggccaccgccgatgacatc
cgcggctggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagatggacggcctgttctgcgagcgcatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgttgcggcgtg
gaggtcaccaagtcctccgtgcgccgtgagcgcatggggcacgtggagctcgccgccccc
gtcacccacatctggtacttcaagggcgtgcccagccgcctcgggtacctgctggacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacatggtcacctacgtggac
gagcaggcgcgtcacgacgacatgcccgatctccaggcccgcttcgacctcgaggtcaag
gagctggagaacgagcgcgacgccgcgatcaacgaccgcgccctctccgcggagaaggac
ctcgcccagctcgaggaggagggtgcgaaggccgatgcgaagcgcaaggtccgcgactcc
ggcgagcgcgagcaggcgcagatccgcaagaagtacgacgccgagatcgagcgcatcacc
cgcatctgggagcgcttcaagaccctcaaggtcgcggacctcgagggcgatgagcagctc
taccgcgcgatgaagctgcgctacggcacctacttcgagggcggcatgggcgccgaggcg
ctccagcgtcgtctggcggacttcgacctcgaggccgaggcggcctcgctgcgcgaggtc
atcgccaccggcaaggggcagaagaaggcccgggcgctgaagcgcctcaaggtggtctcc
gcgttcctgagcaccaccaactcccccgtcggcatggtgctggacgcggtcccggtgatc
ccgccggatctgcgcccgatggtgcagctggacggcggccgcttcgcgacctccgatctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctcaagcggctgctggatctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtcggtggactcg
ctgttcgacaacggccgtcgcggccgtcccgtcaccggcccgggcaaccgcccgctgaag
tcgctctccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctgggcaag
cgtgtggattactccgcccgctccgtgatcgtcaacggcccgcagctgagcctgcaccag
tgcggcctgcccaagggcatggcgctggagctgttcaagcccttcgtcatgaagcgcctg
gtggagctcagccatgcccagaacgtcaaggccgccaagcgcatggtggagcgcgcccgc
cccgaggtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgtctgggcatccaggcgttcgagccgcagctggtggagggcaag
gccatccacctgcacccgctggtgtgcgcggcgttcaacgcggacttcgacggcgaccag
atggcagtgcacctgccgctgagcgcggaggcgcaggccgaggcccgcatcctgatgctg
tccagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgcccgcacaggac
atgatcatcggcctgtaccacctcaccaccgtgcgcgaggagaccgcgggcagcggccgc
tccttcgcctccgtggccgaggcggtcatggccttcgaccgtggggagctgcacctgaac
gcgccggtctcgctgcgcttcacggacatcgcgccgcccagcgactgggaggcgccggag
ggctggaccgagggtgacccgatcatcctcaccaccaccctcggcacggtctacttcaac
gagacgctgccggtggacttcccgttcgtgcagggccaagtgggcaagaagcgcctgggc
ggcatcgtcaacgccctcgcggagcgctacgacaagggccaggtggccgcgtcgctggac
gccctgaaggcgtacggcttctcgtggtcgacccgttccggtgcgtccttcgcgctgtcc
gacgtcgtcacgccccccggcaaggccgagatcatcgagcgcttcgagggcaaggccgcg
caggtccaggagaaccgcgatctgggactcatctccgagtccgagcgcaacgcggagctc
atcgacatctggaccgaggcgaccaacgaggtcgaccaggcgatgcgggagaacttcgag
cccaccaacacgatctaccgcatggtggactccggcgcccgaggcaactggatgcagatc
cgccagatcgcgggcatgcggggcctggtgaccaacccgaagggcgagatcatcgcgcgc
ccgatcctctccaactacaaggaggggctctcggtcctggagtacttcatcgcctcgcac
ggctcccgcaagggcctggcggacacggcgctgaagaccgcccagtcgggctacctgacc
cgtcgtctggtggacgtctcgcaggacgtcatcgtccgcgaggacgactgcggcaccacc
aagggcctgcagctgccgatcgcggtcgaggaggcgggcgcgctgcgcacgcacgagcac
gcggagtccacggtctacggccgtgtgctcgcgaccgcggcgatcggcgccgacggctcc
gaggcggcgccggccggcaccgagctcggcgacgtggtcatcgagcagctggtcgcggcc
ggcgtgcgccaggtcaagatccgctccgtgctcacctgcgactcggcggtgggcacctgc
gcccagtgctacggcaagtccctggccaccggccagctggtggacatcggcgaggccgtg
ggcatcgtcgctgcccagtcgatcggcgagcccggcacccagctgaccatgcgtaccttc
cactccggtggtgtggccagcgccgacggcgacatcacgcacggtctgccccgtgtgcag
gagctgttcgaggcccgcaccccggccggcttcgcgccgatctccgagttctccggccgt
gccgagatcgaggagaacgacaagcagcgcaagatcaccgtcaccccggacgacggctcg
gacccggtctcgtacaccgtctccaagcgcgtcaccctgctgatcggcgacggcgaccac
atcgaggtcggccagcagctcacgcagggctcggtggatccgaagcaggtgctgcgcatc
ctcggcccccgcgcggtgcagcagcacctggtggacgaggtgcagaaggtgtacatcagc
cagggcgtggacatccacgccaagcacatcgaggtcatcgtgcggcagatgctgcgccgg
atcacggtcatcgagtccggtgataccggcctgctgcccggcgacttcgccgagcgcgtc
accttcgagcgggagaaccgccgggtgctctccgagggcggccagccggcctcgggccgt
ccggagctgatgggcatcaccaaggcgtcgctggcgaccgagtcgtggctctcggcggcc
tccttccaggagaccacccgcgtgctcaccgaggccgccctgaaccgcaagagcgatcag
ctcatggggctcaaggagaacgtcatcatcggcaagctcatcccggccggcaccggcctg
gcgcgcttccgccacatcgcggtggagcccaccgacgaggcgaaggcgcagatgtaccag
gtgcccggctacgacgagctggacttctccggcttcggccagaccggcgccgtcaacctc
gacgacatcgactacgccgatcccttccgcaccgacttccggtga
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