Burkholderia savannae: WS86_02050
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Entry
WS86_02050 CDS
T07932
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bsav
Burkholderia savannae
Pathway
bsav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WS86_02050 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsav03021
]
WS86_02050 (rpoB)
03400 DNA repair and recombination proteins [BR:
bsav03400
]
WS86_02050 (rpoB)
Enzymes [BR:
bsav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WS86_02050 (rpoB)
Transcription machinery [BR:
bsav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WS86_02050 (rpoB)
DNA repair and recombination proteins [BR:
bsav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WS86_02050 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
UbiD
BSH_YknX
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AOJ79523
LinkDB
All DBs
Position
1:369722..373828
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVLTAQRKSEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLFFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLEAAKTKYISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITEGVLEKLREAKIKEIQTLYTNDLDQGPYISSTLRVD
ETVDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
IGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAISDDGSLVDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLMKYTRSNQNTNINQRPIVKMG
DKVARGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEELDSFSDDEILELAKNLREGVPFAT
PVFDGATEEEMSKMLDLAFPDNIAEQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgttccatc
gttcaccaagtgccttttctgctggccacccagcttgaatcattcagcacatttctgcaa
gccgatgtgctcaccgcgcaacgcaagtccgaagggttgcaggccgccttcacgtcggtg
tttcccatcgtctcgcataacggctttgctcgtctcgagttcgtgagctatgcgttgtcg
tcgccggcgttcaacatcaaggaatgccagcagcgcggcctgacctattgctcggcgctg
cgcgcgaaggtgcgcctcgtgctcctcgacaaggagtcgccgagcaagcccgtcgtcaag
gaagtcaaggaacaggaagtgtacatgggcgaaattccgctcatgacgccgaccggttcg
ttcgtcatcaacggcaccgagcgcgtgatcgtgtcgcagctgcaccggtcgcccggcgtg
ttcttcgaacacgacaagggcaagacgcatagctcgggcaagctgctgttctccgcgcgg
atcattccgtaccgcggctcttggctcgacttcgaattcgatccgaaggacgtgctgttc
ttccgcgtcgaccgtcgtcgcaagatgccggtcacgattctgttgaaggcgatcggcctc
acgccggaacagatcctcgcgaacttcttcgtcttcgacaacttcacgctgatggacgaa
ggcgcgcagatggagttcgtgcccgagcgcctgcgcggcgaagtcgcgcgcttcgacatc
actgatcgcgaaggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctcgaagccgcgaagaccaagtacatctcggtgcccgaagactatctgctcggc
cgcgtgctggcgaagaacgttgtcgacggcgacacgggcgaagtgatcgcgaacgcgaac
gacgagatcacggaaggcgtgctcgagaagctgcgcgaagcgaagatcaaggaaatccag
acgctctacacgaacgatctggaccagggcccgtacatctcgtcgacgctgcgtgtcgac
gaaaccgtcgacaagacggccgcgcgcatcgcgatttaccggatgatgcgcccgggcgag
ccgcccacggaagaagccgtcgaggcgctgttcaaccgcctgttctacagcgaagacgcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgagatc
atcggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgatatcgaccacctcggcaaccggcgcgtgcgc
tgcgtcggcgaactggcggaaaatcagttccgcgcgggcctcgtgcgcgtcgagcgcgcg
gtgaaggaacgcctcggccaggccgagagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgtgtttccgcactgggc
ccgggcggcctgacgcgcgagcgcgcgggcttcgaagtgcgcgacgtgcacccgacccac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctcatcaactcg
ctcgcgctgtacgcgcacctgaacgagtacggcttcctcgagacgccgtaccgcaaggtc
gtcgacagcaaggtgaccgaccagatcgattatctgtcggcgatcgaggaaggccgttac
atgatcgcgcaggcgaacgcggcgatcagcgacgacggctcgctcgtcgacgaactggtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgcatccaatacatggac
gtggcgccgtcgcagatcgtgtcggttgcagcgtcgctgattccgttcctcgagcacgac
gatgcgaaccgcgcgctgatgggctcgaacatgcagcgccaggccgtgccgtgtctgcgt
ccggagaagcccgtcgtcggtaccggcatcgagcgcaccgtggcggtcgactcgggcacg
acggtgcaggcgttgcgcggcggcgtcgtcgactatgtcgacgcgggccgtatcgtgatt
cgcgtgaacgacgacgaagcggtcgcgggtgaagtcggcgtcgacatctacaacctgatg
aagtacacgcgttcgaaccagaacacgaacatcaatcagcgtccgatcgtgaagatgggc
gacaaggtcgcgcgcggcgacgtgctggccgacggcgcgtcgaccgacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagcgggtcgtggccgacgatcgctacacgtcgatccacatcgaa
gagctgagcgtcgttgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcaccgtgatcgacgtccaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacctgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcgcgcatgctcgtgggcaaggtcgcgaacggtggtccgaagaagctcgcgaagggc
acgaagatcgaccaggcttacctggaagacctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaagcggcggcgcagctcgaagcgatcaagaactcgatcgaagaaaag
cgtcaccagttcgacctcgcgttcgaagagaagcgcaagaagctgacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtcaagcgtcgcctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgttccg
gttgaagacatgccgtacatggccgacggccgtccggcggacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcatctcggctgggccgcg
aagggcctcggctggcgtatcggcgaaatgctcgcgcgccagacgaagatcgaggaactg
cgcgtgttcctgacgaagatctacaacgagtcgggccgcgcggaagagctggacagcttc
agcgacgacgaaatcctcgagctcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggtgcgaccgaggaagagatgtcgaagatgctcgatctcgcgttcccg
gacaacatcgccgagcagctcgacatgaacccgtcgaagaaccaggtgcgcctgtacgac
ggccgcacgggcgagccgttcgagcgccgcgtgacggtgggctacatgcactacctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtt
acgcagcagccgctcggcggtaaggcgcagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcgctcgaagcgtatggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggaccaaggtttatgaaaacctggtcaagggcgaccacgtg
atcgacgccggcatgccggaatccttcaatgtgctggtgaaggaaatccgctcgctcggt
atcgatatcgatctcgaccgcaattaa
DBGET
integrated database retrieval system
