Burkholderia savannae: WS86_02060
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Entry
WS86_02060 CDS
T07932
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsav
Burkholderia savannae
Pathway
bsav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS86_02060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsav03019
]
WS86_02060
03400 DNA repair and recombination proteins [BR:
bsav03400
]
WS86_02060
Enzymes [BR:
bsav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WS86_02060
Messenger RNA biogenesis [BR:
bsav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS86_02060
DNA repair and recombination proteins [BR:
bsav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WS86_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOJ79525
LinkDB
All DBs
Position
1:378283..380130
Genome browser
AA seq
615 aa
AA seq
DB search
MSRALEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSESGR
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFGIRQKHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGASHLIEVLRGARTEKVLQRGHESLSTFGIGAELSEAEWRAIFRQ
LVAFGYLAVDHGGFGALVMTEASKPVLKGEETVTLRRYVKPARTRQSSGRSGARVDPTAG
MNARERACWERLRTWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARK
LDRFGDELLEVVEAA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcgctcgaaattctcaacgaagtctttggctaccccgccttccgcggtcaa
cagggcgagatcgtcgagcacgttgcggcgggcggcgactgtctcgtgctgatgccgacg
ggcggcggcaagtcgctctgctatcagattccggcgctcgtgcgcagcgagtcgggccgc
ggcgcgggcatcgtcgtgtcgccgctgatcgcgctgatgcaggatcaggtcgccgcgctg
tccgaagtcggcgtgcgcgccgcgtatctgaattcgacgctctccggcgccgaagcggcc
gcgaccgagcgcgcgctgcgcgacggcgacatcgatctgctctacgtcgcgcccgagcgt
ctgatgacgccgcgcttcctcgatctgctcgagcgcgcgcgcatcggccttttcgcgatc
gacgaggcgcattgcgtatcacagtgggggcacgatttccggcccgaatacatccagttg
tcggtgctgcacgaacgcttcccggacgtgccgcggatcgcgctcacggcgaccgccgac
gcgatcacgcgcgacgagatcgtccagcgcctcgccctcgacgacgcccggatcttcgtg
tcgagcttcgatcggccgaacatccgttaccggatcgtcgaaaaggacaacgcgcgctcg
caactgctcgacttcatccgcgcggagcacacgaacgcggacggcacgaccgacgcgggg
gtcgtctactgcctgtcgcgtcgcaaggtcgaggagacggccgagtggctgaaggcgcag
ggggtacgcgcgctgccgtatcacgcgggaatggagttcggaatccggcagaagcaccag
gagatgttccagcgcgaggaaggggtcgtgatgtgcgcgacgatcgcgttcgggatgggc
atcgacaagccggacgtgcgcttcgtcgcgcacctggatttgccgaagagcgtcgagggc
tactaccaggagacggggcgcgccggccgcgacggcatgccggcgaacgcatggatggcg
tacgggctcggcgatgtcgtccagcagcgcaagatgatcgacgaatcggacgcggacgat
acgcacaagcgcgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggcg
tcgtgccgccgcgtgcggctcctcgcgtatttcggcgagacgagcgggccgtgcggcaat
tgcgacacctgcctcgagccgccggcgacatgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgtttcgcgcgcagcgcgcgagcggcttcaatttcggcgcgagccacctg
atcgaagtgctgcgcggcgcgcgcaccgaaaaggtgttgcagcgcggccacgagagtctc
agcacgttcggcatcggcgccgagctgtccgaggccgaatggcgcgcgatcttccggcaa
ctggtcgcgttcggctatttggccgtcgatcacggcggcttcggcgcgctcgtgatgacc
gaggcgagcaagccggtgctcaagggcgaggagacggtcacgctgcgccgctacgtgaag
cccgcgcgcacccgacagtcgtcgggccgcagcggcgcgcgcgtcgatccgacggcgggc
atgaacgcgcgcgagcgcgcgtgctgggagcggctgcgcacgtggcgcgccgaaaccgca
aagagcgacggcgtgccggcgtacgtgatctttcacgacgcgacgctcgcggagatcgcg
cgcaacgcgccggaatcgatcgacgatctgcgccatattccgggcatcggcgcgcgcaag
ctcgaccgcttcggcgacgagctcctcgaggtcgtcgaagcggcctga
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