Burkholderia savannae: WS86_10430
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Entry
WS86_10430 CDS
T07932
Name
(GenBank) RNA-binding protein hfq
KO
K03666
host factor-I protein
Organism
bsav
Burkholderia savannae
Pathway
bsav02024
Quorum sensing
bsav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS86_10430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WS86_10430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsav03019
]
WS86_10430
03036 Chromosome and associated proteins [BR:
bsav03036
]
WS86_10430
Messenger RNA biogenesis [BR:
bsav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WS86_10430
Chromosome and associated proteins [BR:
bsav03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
WS86_10430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SelB_WH1
Motif
Other DBs
NCBI-ProteinID:
AOJ80986
LinkDB
All DBs
Position
1:2257816..2258484
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AA seq
222 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGPRGPRPGGGHGGGRPGGREGGGHGPYGSHGGSREPRGEGGGYGA
RESRGDGGGYGSRDSRGDGGYGARERGDGGYGARERSDGGYGSREPRDGYGSREPREPRE
SYGAPREPQDGVSTPSGAQERNGNGPVIVTRRRRSLGPTDGQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggcattcgcctgacgggatgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatttcgacgattcagctcgatacgggcggctcccgtccgggcggcccgcgcggcccg
cgtccgggcggcggccatggcggcggtcgccccggcgggcgcgaaggcggcggccacggt
ccgtacggctcgcacggcggctcccgcgagccgcgcggcgaaggcggcggttacggcgca
cgcgaatcccgcggcgacggcggcggctacggctcccgcgattcccgtggcgacggcggt
tacggtgcgcgtgagcgcggcgacggcggctacggcgcacgcgaacgcagcgacggcggc
tacggctcccgtgaaccccgcgacggctacggctcccgcgagccgcgcgaaccccgcgaa
tcgtacggcgcgccgcgcgagccgcaagatggcgtgtcgacgccgtccggcgcacaggag
cgcaacggcaacggccccgtgatcgtcacgcgccgccgccgctcgctcgggccgacggac
ggtcaataa
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