Burkholderia savannae: WS86_16230
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Entry
WS86_16230 CDS
T07932
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bsav
Burkholderia savannae
Pathway
bsav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WS86_16230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsav03400
]
WS86_16230
Enzymes [BR:
bsav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WS86_16230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WS86_16230
DNA repair and recombination proteins [BR:
bsav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WS86_16230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOJ82011
LinkDB
All DBs
Position
1:complement(3573062..3573892)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPFVAGRRVKRVDVRTAMLRWPVPAGFAEMLKSREVLSVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPNDAPPPAPAKHDHVDWIFDEFVLRFRDPRRFGAVLWH
PRDAGDVHAHPLLASLGVEPFSAAFTGELLYKRTRGRKVAVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTAAAGRVSLPRYERLAEAVRATLADAIERGGSTLRDFVGSNGESGYFQLD
CFVYDRAGEPCRVCGSPIRQIVQGQRSTYFCPNCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccggaagtcgaggttacgcgccgaggcatcgagccgttcgtcgccggg
cgacgcgtgaagcgcgtcgacgtgcgcaccgcgatgctgcgctggcccgtgcccgcgggc
ttcgccgagatgctgaagtcgcgcgaggtgctgagcgtcgagcggcgcggcaagtacctg
ctgttcgaagtcgacgccggatggttcatcgtccatctcggcatgacaggcacgctgcgc
gtgctgccgaacgacgcgccgccgcccgcgcccgcgaagcacgatcacgtcgactggatc
ttcgacgagttcgtgctgcgctttcgcgatccgcgacgcttcggcgcggtgctctggcat
ccgcgcgacgcgggcgacgtgcatgcgcatccgcttctcgcgagcctcggcgtcgagccg
ttctcggccgcgtttaccggcgagctcctttacaagcgcacgcgcgggcgcaaggtggcc
gtcaagcaggcgctgctcgcgggcgacatcgtcgtcggcgtcggcaacatctatgcgtcc
gagagcctctttcgcgccggcatccggccgaccgcggcggccgggcgcgtgtcgctgccg
cgctacgagcgcctcgccgaggccgtgcgcgcgacgctcgccgacgcgatcgagcgcggc
ggcagcacgctgcgcgacttcgtcggcagcaacggcgaaagcggctacttccagctcgac
tgcttcgtctacgatcgcgcgggcgagccgtgccgggtgtgcggctcgccgatccgccag
atcgtccagggtcagcggtccacttatttttgtccgaattgccagcgttga
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