Brevundimonas subvibrioides: Bresu_2193
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Entry
Bresu_2193 CDS
T01291
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bsb
Brevundimonas subvibrioides
Pathway
bsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bresu_2193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsb03019
]
Bresu_2193
03009 Ribosome biogenesis [BR:
bsb03009
]
Bresu_2193
Enzymes [BR:
bsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Bresu_2193
Messenger RNA biogenesis [BR:
bsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bresu_2193
Ribosome biogenesis [BR:
bsb03009
]
Prokaryotic type
rRNA processing factors
Bresu_2193
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
RhlB
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ADL01503
UniProt:
D9QJE2
LinkDB
All DBs
Position
2194967..2197699
Genome browser
AA seq
910 aa
AA seq
DB search
MSKTMLIDAAHAEETRVAIVDGRQVEEFDFESKTKRQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFNEIHPDYYQIPAADREAIMAEAHSADDDSDDENARDSDDGDSEGGMAEE
ERLKRRLMRRYKIQDVIKRRQILLVQVVKDERGGKGAALTTWLSLAGRYCVLMPNTGKGG
GISRKITQATDRKRLKAAASALDVPRGMGLIIRTAGAKRTKAEIKRDYEYLLRLWETIRE
TTLASHAPSLIYEEENLVRRAVRDMFDKDFDGIQVEGVEGFKEARDFMRVLMPSQAKKVH
LYQGSKPLFAANGIEELLTQIHQPVVPLKSGGYLVINQTEALVAIDVNSGRATKERNVEA
TAFKTNCEAAVEAARQLRLRDLAGLVVIDFIDMDESKNNRTVERILKDELSFDRARIQMG
RISGFGLMEISRQRRRLGVLEGATEVCPHCQGAGRVRSAESAALMVLRAVDIEAGKNGAG
SINLKVSSAVALYILNHKRDYLQRLLERRGLAVIIQIDDRLGQGESAIERTETNEDFVAP
EAVVSLSDLDDDFDDAAYSDEDDNDDDDDFIADEDESALDREDTDDDEPRERAERPERVE
GERGRGRGRRRRGGRRDEEAAPIAADAAVEGVASDDDDDSEAGRRRRRGRRGGRRVREDG
DTASTGSSDFFWVRGRTPSLDDPYVWFDPLNPPARADRGERAPVPSGPVEAAADVEERIG
ERPEGEIAGDREGGRSRRRRRGRGRGAERATPHDLKVEGRATNEGMPADGSPDVPMAVML
SEDASEAPAPVVVAEPQRRRVRRKTSASIVEADTAPLDEFVAEETGIAPPLEPEMAFVAE
ADAPEVEAEVELEVEPAPFVSEPEPEPAVLVEAVAPPKPEADLSAIIASDPAQITAPPVK
PKRGWWRLGS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaccatgcttatcgatgcggcgcacgcggaagaaacccgcgtcgccatcgtg
gacggccgccaggttgaggaattcgacttcgagtcgaaaaccaaacgccagcttcgcggc
aacatctatctcgccaaggtcacccgcgtagagcccagcctgcaggccgccttcgtcgag
tacggcggcaatcgtcacggcttcctcgccttcaacgaaatccaccccgactactaccag
atcccggccgccgaccgcgaagccatcatggccgaggcgcactcggccgatgacgactcc
gacgacgagaacgcccgtgattccgatgacggcgattccgaaggcggaatggccgaggag
gagcgcctgaagcgtcgcctgatgcggcgctacaagatccaggacgtcatcaagcgccgc
cagatcctgctggtgcaggtcgtcaaggacgagcgcggcggcaagggcgcggccctgacc
acctggctgtcgctggccggccgctactgcgtgctgatgcccaacaccggcaagggcggc
ggcatctcccgcaagatcacccaggccaccgatcgcaagcgcctgaaggccgccgcgtcc
gccctggacgtgccgcgcggcatgggcctgatcatccgcacggccggcgccaagcgcacc
aaggccgagatcaagcgcgactacgaatatctgctgcgtctgtgggagacgatccgcgag
accaccctcgcctcccacgccccctcgctgatctacgaggaagagaacctggtccgccgc
gccgtgcgcgacatgttcgacaaggatttcgacggcatccaggtcgagggcgtcgagggc
ttcaaggaagcgcgcgacttcatgcgggtgctgatgccctcgcaggccaagaaggtgcac
ctgtatcaggggtcgaagccgctgttcgccgccaacggcatcgaggaactgctgacgcag
atccaccagccggtcgtgccgctgaagtccggcggctatctggtcatcaaccagaccgag
gccctggtcgccatcgacgtcaactccgggcgcgccaccaaggaacgcaacgtcgaggcc
acggccttcaagaccaactgcgaggccgccgtcgaggccgcccgccagctgcgcctgcgc
gacctcgccggtctggtggtcatcgacttcatcgacatggacgagtccaagaacaaccgg
accgtcgaacgcatcctgaaggacgagctcagcttcgaccgggcgcggatccagatgggc
cgtatctcgggcttcggcctgatggaaatcagccgccagcgtcgccgcctcggcgtgctg
gaaggcgcgaccgaggtttgcccgcactgccagggcgccggacgtgtccgctcggccgag
tccgccgcgctgatggtgctgcgggccgtcgacatcgaggccggcaagaacggcgcgggt
tcgatcaacctgaaggtctcctcggccgtcgccctctacatcctgaaccacaagcgcgac
tatctgcagcgcctgctggagcgtcgcggcctggccgtcatcatccagatcgacgatcgc
ttgggtcagggcgagagcgccatcgagcgcaccgagaccaacgaggacttcgtcgcgccg
gaagccgtcgtctccctgtcggacctcgacgacgatttcgatgacgccgcctacagcgac
gaggacgacaacgacgacgatgacgacttcatcgccgacgaagacgaaagcgcgctggac
cgggaggatacggacgacgacgagccgcgcgagcgtgccgagcggccggaacgggtcgag
ggcgagcgcggccggggtcgcggccgtcgccgtcgcggtggacgccgggatgaggaagcc
gcaccgatcgccgccgatgccgcggtcgagggcgtcgcgtccgacgacgatgacgacagc
gaggccggccgccgtcggcgccgcggtcgccgtggcgggcgtcgcgtgcgcgaggacggc
gacacggcgtcgaccggctccagcgacttcttctgggtgcgcggtcgcacgccttcgctg
gacgatccctatgtctggtttgatccgctgaacccgccggcccgtgccgatcgcggcgag
cgggcccccgtgccgtcggggccagtcgaggctgcggcggatgtcgaggaacggatcggt
gagcgtcccgagggcgagatcgccggcgaccgcgagggcggccgttcgcgccgtcgccgt
cggggtcgcggtcgcggcgccgaacgggccacgccgcacgatctgaaggtcgagggtcgc
gccaccaacgagggcatgcccgccgacggttcgccggacgtccccatggccgtcatgctg
tccgaggacgcgtccgaagccccggctccggtcgtcgtcgccgagccgcagcgccgccga
gtccgtcgcaagacctcggcatcaatcgtcgaagcggatacggctccgctcgatgagttc
gtggccgaagagaccggaatcgccccgcctctggagccggagatggccttcgtcgcagag
gccgacgcgcccgaggtcgaagccgaggtcgagctcgaggtcgaaccggcacccttcgtg
tccgagcctgagccggaacccgcggtcctcgtcgaggccgtcgctccgccgaagcccgag
gccgatctgtcggccatcatcgccagcgatccggcgcagatcaccgcacccccggtcaaa
cccaagcggggatggtggcgtctgggatcgtga
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