Brevundimonas subvibrioides: Bresu_2215
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Entry
Bresu_2215 CDS
T01291
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bsb
Brevundimonas subvibrioides
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsb03016
]
Bresu_2215
Enzymes [BR:
bsb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Bresu_2215
Transfer RNA biogenesis [BR:
bsb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Bresu_2215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADL01525
UniProt:
D9QJG4
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All DBs
Position
complement(2219568..2220716)
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AA seq
382 aa
AA seq
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MTPITTNDALVQFCSDVASAPFIAVDTEFMRETTYWPKLCLIQAATPTHEAIIDPQADGL
DLTPFLDILRDPAIVKVFHAARQDTEIFVKLGAMPKPMFDTQVAAMAAGFGDQVAYDGLV
RQMLKIDLDKGSRFTDWSRRPLSDAQLTYAIGDVTHLAALYPKLRDRLAREGRLDWVTSE
MEDLVNPELYDTTPDKAWKRLKPKKYNAKYLAAFKATAVWREQAAQDRDQPRGRILKDEA
IDEIATQVPTDVEAFNRLRSVPKGFGGSRLGLELAETLKRVMLDPEAHAPKMDRPAHNQP
APPSVVELLKVLLKAKSDNAGVASKLIANVADLEKIALSDAADVDALKGWRRQLFGEDAL
KLKRGELALVLNGARVEVVEIE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatcaccaccaatgacgcgctggttcaattctgttccgatgtcgcgagcgcc
ccgttcatcgcagtcgacaccgagttcatgcgagagacgacctactggcccaagctgtgc
ctgatccaggccgcgacgccgacgcatgaggcgatcatcgatccccaggcggacggtctg
gacctgacgcccttcctcgacatcctgcgcgatcccgcgatcgtgaaggtgttccacgcg
gcgcgtcaggacaccgagatcttcgtcaagctgggcgccatgcccaagccgatgttcgac
acccaggtcgcggcgatggcggccgggttcggcgatcaggtcgcctacgacggtctggtc
cgccagatgctcaagatcgatctcgacaagggcagccggtttaccgactggtcgcgccgg
cccctgtccgacgcgcagctgacctatgcgatcggggacgtgacccatctggcggcgctg
tatccgaagctgcgcgaccggctggcgcgcgaggggcggctggactgggtgacgtcggag
atggaggatctggtcaatccggagctctacgacaccacccccgacaaggcgtggaagcgg
ctgaagcccaagaagtacaacgcgaaatacctcgccgccttcaaggcgacggcggtgtgg
cgcgagcaggcggcgcaggatcgcgaccagccgcgcgggcgtatcctgaaggacgaggcc
atcgacgagatcgcgacccaggtcccgaccgacgtcgaggccttcaaccggctacggtcc
gtgccgaaggggtttgggggatcgcgcctcgggctggagctggccgagaccctgaagcgg
gtcatgctggaccccgaggcccatgccccgaagatggatcgcccggcccacaaccagccc
gcgccgccgtcggtcgtggaactgctgaaggtgctgctgaaggccaagagcgacaacgcg
ggcgtcgcctccaagctgatcgccaatgtggccgacctggagaagatcgccctgtcggac
gccgcggacgtggatgcgctcaagggctggcggcgtcagctgttcggcgaggacgcactg
aagctcaagcgcggcgagctggccctggtgctgaacggcgcgcgggtcgaggttgtcgag
atcgaatag
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