Brevundimonas subvibrioides: Bresu_3298
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Entry
Bresu_3298 CDS
T01291
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsb
Brevundimonas subvibrioides
Pathway
bsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bresu_3298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsb03019
]
Bresu_3298
03400 DNA repair and recombination proteins [BR:
bsb03400
]
Bresu_3298
Enzymes [BR:
bsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bresu_3298
Messenger RNA biogenesis [BR:
bsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bresu_3298
DNA repair and recombination proteins [BR:
bsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bresu_3298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
Helicase_C
RQC
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADL02604
UniProt:
D9QG62
LinkDB
All DBs
Position
3405018..3406895
Genome browser
AA seq
625 aa
AA seq
DB search
MPADSPTTAPGLDAARQTLERVWGHADFRGLQARVVTEIMAGRDVLAVLPTGGGKSVCYQ
IPAILRPGLGLVVSPLIALMTDQVEALKQQGVAAARLDSGLSLDERSSVLRAAGSGDLDL
LYVSPEGLASGALLDRLRDLPLSLIAIDEAHCVSQWGHDFRPDYRTLGRLSEFFPGVPRI
AVTATADARTRDDILASLHLEHASVFVDSFARPNLQLSAVRKESASRARTDAHVIELVRA
RRGQSGVVYCGSRDGCERVADALTSAGTNAIAYHAGMPGPERDRRLARFLAEEGAVMVAT
IAFGMGVDKADVRFVIHADPPGSLEAYWQEIGRAGRDGEPAEGITLYGPSDIAWTLRRLE
TRPMAEEVKAVQTRKARQLFAMLDGAICRPQAVRRYFGETDAGPCGVCDVCADPPALYDA
TVPAQKALAAVQRLGGRFGRGRIVDHLLGKTKDVQPWEQALSTWGIGKDIAAAGWRDIVD
HLLFEGLLLEDPNDGKPLVGLGDAEAVRAVYKGERSIEVRRTPPGFEASSRSGSPRARTR
NDRNAAVEALDADVRARFETLRAWRRDRAAEQHVPPYVIFQDKTLLEIAQREPGSLDALA
AISGVGQSKIDRYGKGVLEALTTGV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgactcacccaccacagcgcccggcctcgacgccgcgcgccagacgctggag
cgggtgtggggccatgcggactttcgcggcctgcaggcccgggtcgtcaccgagatcatg
gccggccgcgacgttctggcagtgctgccgaccggcgggggcaagagcgtctgctaccag
atcccggccatcctgcgtcccggcctgggtctggtcgtgtcgcccctgatcgcgctgatg
accgaccaggtcgaggcgctgaagcagcagggcgtggctgccgcgcggctggattcgggc
ctgtccctggacgagcggtccagcgtgctgcgcgccgccggttccggcgacctggacctg
ctgtacgtttcgccggaaggcctggcctcgggggccctgctggaccggttgcgcgacctg
cccctgtcgctgatcgcgatcgacgaggcccactgtgtcagccagtggggccacgatttc
cggccggactaccggacgctgggccggctgtcggagttcttccccggcgtgccccgcatc
gccgtgacggcgacggccgacgccaggacccgcgacgacatcctggcctccctgcacctg
gagcatgcgagcgtcttcgtcgacagcttcgcccgtccgaacctgcagctgtctgcggtc
cgcaaggagagcgcctcgcgcgccagaaccgacgcccacgtcatcgagctggtccgcgcc
cggcgggggcagtcgggcgtggtctattgcggcagccgcgatggctgcgaacgcgtcgcc
gacgccctgacctcggccggcaccaacgccatcgcctatcacgccggcatgccggggccg
gagcgcgaccgccgtctggcccgcttcctggcggaagagggtgccgtgatggtggcgacc
atcgccttcggcatgggggtggacaaggcggacgtccggttcgtcatccacgccgatccg
ccgggcagtctcgaggcctactggcaggagatcggccgggcgggccgtgacggcgaaccg
gccgagggcatcaccctgtatggcccgtccgacatcgcctggacactgcgccggctggag
acccgccccatggccgaggaggtcaaggcggtccagacgcggaaagcgcgccagctgttc
gccatgctggacggcgcgatctgtcgcccccaggccgtgcgccgctatttcggcgagacc
gatgccgggccgtgcggggtgtgcgacgtctgcgccgatccgcccgccctctacgacgcc
accgttcccgcccagaaggccctggccgcggtgcagcggctgggcggccggtttggacgc
gggcggatcgtggatcacctgctgggcaagacgaaggatgtccagccgtgggaacaggcc
ctgtcgacctggggcatcggcaaggacatcgccgccgccggctggcgcgacatcgtcgac
cacctgctgttcgaggggctgctgctggaagaccccaatgacggcaagccgctggtcgga
ctgggcgatgccgaggccgtgcgcgccgtctacaagggcgagcggtcgatcgaggtgcgg
cgcaccccgcccggcttcgaggcgtcaagccggtcgggcagtccccgggcccggacccgc
aatgaccggaacgccgccgtcgaggcgctggacgccgacgtgcgggcacggttcgagacg
ctacgggcctggcggcgcgaccgcgcggccgaacagcatgtgccgccctatgtgatcttt
caggacaagaccctgctcgagatcgcgcagcgtgaaccggggtctctggacgccctggcg
gcgatttccggcgtcggacagtccaagatcgatcgctacggcaagggcgtgctggaggcc
ctgaccaccggggtctag
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