Bipolaris sorokiniana: COCSADRAFT_103344
Help
Entry
COCSADRAFT_103344 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_103344
Spliceosome [BR:
bsc03041
]
Common components
Common spliceosomal components
General mRNP proteins
COCSADRAFT_103344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PHM7_cyt
RRM_5
Motif
Other DBs
NCBI-GeneID:
19129839
NCBI-ProteinID:
XP_007705668
JGI:
Cocsa1_103344
UniProt:
M2QTS3
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MSTSAAVDALLEETAREVEMKDRERNASSEARDLDTRRDDRDRHSDRRDRRDRSRGRGDR
YRESNGDRHRSRDRDHRRREGSRPRSSKGADTDEDRDRHRRSSSRDRRGGPRRDRGDFYS
GGGRPRTRSPRRDRVDDRYRDRSRDRRRNGDERRNSRRNNTPPEPEVTEDDRDKRTIFVQ
QISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRSKGVGYVEFKDEESVPQALELTGQKL
KGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVTEKDLQEIFEPFGE
LEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAEMNGFELAGRQIRVGLGNDKFTPES
TANLLRTFSQQAQSYQGSAFSGAGGRGAYAGGSGGVFDRTHSKDDRGVSGASALDDTDVA
GVNFKTYDRSKLMDALARRDNPEPTKQGAQPVVSKPRVPVVDKPMASKCIKIENAFDPDE
EQRNWGDNWVKDLELEVKSECDKKYGKVVHIAVDTNSEGDIFVKFDSVSGGEKALQGLNG
RNFNHRTIRASYVVDKIYNSLWGAAASRF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcagccgctgttgatgccctcctcgaggagacggcgcgcgaggtcgagatg
aaggaccgcgagcgcaacgctagcagcgaggcgcgcgacctcgacacccgccgagacgac
cgcgaccgccactcagatcgacgcgaccgacgtgacaggagcaggggacgaggtgaccgt
tatcgtgagtccaatggagaccggcaccgaagccgcgatagagatcaccgaagaagagaa
ggaagccgacccagatcgagcaaaggcgctgacacagatgaagaccgtgataggcatcgc
cgtagcagctcccgagaccggcgtggcggaccccgtcgtgaccgcggtgacttttacagc
ggaggtggacgcccacgcacccgctcccctcgtcgtgaccgtgtcgatgacaggtaccgt
gataggtcccgtgaccgccgccgcaacggtgacgagcgtcgcaacagccgtcgtaacaac
actccgcccgagcccgaagttactgaagacgaccgtgacaagcgcaccatcttcgtccag
cagatctcccagcgtgccgaaacccgccatttgcgcgccttcttcgagcgagttggccca
gttgtggaggctcaaattgtcaaagatcgagtgactggtcgctccaagggtgtcggctat
gttgagttcaaggatgaagagtctgtaccccaagcattggaactgactggtcagaaactg
aagggtgttcccatcatcgcccagcttaccgaagccgagaagaaccgtgctgcccgccca
tcagaaggtggtgccgcgcctggtgctaacggtgctcccttccatcgtctctatgttggc
aatattcactttagtgtcaccgagaaagatctacaggagatctttgagccttttggtgag
cttgagcaggtcatcctccaacgtgatgagatgaaccccggtcgctccaagggatatggt
ttcgttcagtttgttgacccctcgcacgctaagaatgctctcgcagagatgaacggcttc
gagcttgccggtcgccagatccgtgttggtctcggtaacgacaaattcacccctgaatcg
actgctaacttgctccgcaccttctcccagcaagctcaatcctaccagggctctgctttt
agtggagctggtggccgtggtgcatacgcaggtggcagtggcggtgtctttgaccgcaca
cacagcaaggatgatcgtggtgttagtggtgcttctgctcttgacgatactgatgttgct
ggagtcaacttcaagacttacgatcgcagcaagctcatggatgctctcgcccgccgcgat
aaccccgagcctacgaaacagggtgctcagcccgttgttagcaagccacgcgtgcccgtt
gttgataagcccatggcatccaagtgcatcaagattgagaatgcttttgaccctgatgag
gagcagcgcaactggggtgacaactgggtcaaagaccttgaacttgaggtcaagtctgag
tgtgacaagaagtacggcaaggttgttcacattgctgtcgacactaacagtgagggcgac
attttcgtcaagtttgactccgtgtctggcggcgagaaggctcttcagggtctaaacggc
cgtaacttcaaccaccgcaccatccgcgcttcgtacgttgtcgacaagatctacaactca
ctctggggtgctgctgcgagcaggttctaa
DBGET
integrated database retrieval system