Bipolaris sorokiniana: COCSADRAFT_106936
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Entry
COCSADRAFT_106936 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00040
Pentose and glucuronate interconversions
bsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCSADRAFT_106936
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCSADRAFT_106936
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
19130010
NCBI-ProteinID:
XP_007695079
JGI:
Cocsa1_106936
UniProt:
M2TMD0
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MRFFEAATVALTAASTAYGAPMEKRAAAVDELVGFGAGTTGGGSGAGTTVTNCAGLTAAA
KVGGVIKIKGTLTGCGIVRFDVPGTSILGVGKDAGITDGGFRFFKTSNIIVRNLKFYRAP
EGKDLIDIEATTKVWIDHNDFSSIGITGDKDKYDGLLDAKSGSDFLTFSWNKFHDHWKGS
LVGHSDNNGSVDKGKLRVTYHHNSFTAINSRLPSIRFGTGHVYNSCFNGGVSGINSRMGA
QVLVESNSFTNVAKSVVTNLDSDEEGFATEKNNVFSNSPTQITKNGSFTPSYKYTVDPAA
SVCSIVAKSAGVGVVTF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttttgaggctgccactgtggctttgacagctgcttccactgcctatggcgcc
cccatggagaagcgcgctgccgccgttgacgagcttgttggttttggtgctggcaccaca
ggaggaggaagtggagccggtaccactgtcaccaactgcgctggcctgactgctgccgcc
aaagtcggaggtgtcatcaagatcaagggcacgctcaccggctgcggcattgtccgcttc
gatgtccccggcacctccatcctcggtgtaggcaaggacgccggaatcactgacggtggt
ttccgcttcttcaagacttccaacatcattgtccgtaacctcaagttctaccgtgctccc
gagggcaaggatctcatcgacattgaagccaccaccaaggtctggattgaccacaacgat
ttctccagcattggtatcaccggcgacaaggacaagtacgatggtctcttggacgcaaag
tctggatctgactttttgactttctcatggaacaagttccacgaccactggaagggttcc
ctggtcggccactccgataacaacggatccgtggacaagggcaagctgcgcgtgacttac
caccacaactccttcactgcaatcaactcgcgtctgccctccatccgcttcggcacaggc
cacgtctacaactcgtgcttcaacggcggcgtttccggcatcaactcgcgcatgggcgct
caagtgctcgttgagtcgaattccttcaccaatgttgccaagtcggttgttaccaacctc
gactctgacgaggagggctttgcgacggagaagaacaatgttttcagcaacagccctacc
cagattaccaagaatggctctttcacgcccagctacaagtacactgttgaccctgcggcc
agtgtctgcagcatcgtggccaagagtgctggtgtcggcgttgtcaccttctaa
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