Bipolaris sorokiniana: COCSADRAFT_108806
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Entry
COCSADRAFT_108806 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_108806
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
COCSADRAFT_108806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
RdRP_4
ABATE
VitD-bind_III
Motif
Other DBs
NCBI-GeneID:
19130070
NCBI-ProteinID:
XP_007695992
JGI:
Cocsa1_108806
UniProt:
M2TI34
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MDSMVKEWTVLLHRCLERRVHSDVFAAAVAQLHAKSPLPGRKLAALLLRPRVADNSNIDP
RIVIYLEQLLSLKKLDASDVLIVALLYSKVRLPVKTEEKSSKDAQWSNPPELEELIFHRL
HKVFAAEERPVNNVEGVHTLAVVARWMQAMVTSHTSDTMIQAMAGIQQPQQQSINVREGL
AMLVVGVIENSKILRILNHPKAKEVRKELTKSLSSFIPFLSNNSVGSQTSLSLANRLEIS
QKQHDLYEKLPNVNGEGNESAGLEVAALQLDAVMELPQANTRAGLYVFLNSLLVARPLTD
DFVIISHLHTRYKLEPQNMATELITAAFDILANAMYRNEPTQTLFYLKSFLINKIPTLLT
QISGSIFPMTVEMCITQALSHVDPNAFPSFSQGFDDIMGSNNSLSDVRQDYLNACVLHGL
LPAGTVERLLGEAPMQGPPAKRYERKELFNQCKLNFDKVSVYIDELENLDGNAGAIVAAI
ADFISHLCDTQTTMYLKQLCCLIFKKPQAMDVMLQFTSPASILRPLCQFLEDWHYDSDQG
EYQPVYDEFGAILVLIMAFVYRYDLVCHDIGIAHDTFIAKLLQHGHHSIPPDELTEEQGG
HLGSWLKGLYDSDKEGLSNEVFASCRPQDFYLIVPTLFHQTVAACSLGVLSFETVKGGLE
YLGETFLMPSLIGGLTWMASYALLQTHNDLDAITRIFNAILLSAPSSGDAQAMHSTIIAM
VSSRLEKCFRTLQRREPNRNNLDSFLQAIKVHTHYERTVFATMKELDQWTNAPNSTLNTS
LRHTVQQLSQWASTASMQPNPPSYTHRQLYASLKMLGAARTLRAIVDELKTQTDSGNGAA
ALDVGVSIVCAPTVEDSPISVDWVGSTVPAPTPQRTRMNLREMLKQDFDNAASLVATDPL
TAETIVRLHRRVEAHFTSLAESGLQAPPINIPSVNITDMQSQSISEHLNRAMDDAAAASM
VEDISNMDNKALQRSMDELASTEGLDLSGIGMGNGDAGTGDMSTDLGNLPDLDLGDMGGM
GIDMDMNMDMGGGGGGDDDWGLDFDNM
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggattctatggtcaaggaatggacagtccttttgcatcgttgtttagagcgccgcgtc
cattctgatgttttcgctgccgcagtcgcgcagctacacgccaagtctccactgccaggc
cggaaactcgccgctctgctgcttcgcccacgcgtcgcagataacagcaatatcgaccca
cgcattgtaatttacctcgagcaactcttatcgctgaagaagcttgacgcctcggacgtt
ttgattgtcgcgcttctgtattctaaagtccgactaccagtcaagacagaagagaaatcc
tcaaaagatgcgcaatggagcaacccgccagaattggaagaactcatttttcatcgtttg
cacaaggtctttgctgcagaggaacgtcccgtcaacaatgttgagggtgtgcacacccta
gctgttgtagcacgatggatgcaggcaatggtcacctcgcataccagcgataccatgatt
caggccatggctggcatacaacagccacaacagcagtccatcaatgtgcgagagggtctc
gctatgctagtggttggggtaatcgagaattcaaaaatcctccgaatactgaatcaccca
aaagctaaagaggtgcgcaaggaactcacgaaatctctctcatcgtttatcccatttctc
tcaaacaactcggtgggatctcagacatctctgtcgctagcaaatagattagagatctcg
caaaaacaacacgacttgtacgaaaagcttccaaacgtcaatggcgagggaaacgagagc
gctggccttgaagttgctgcgcttcagcttgatgcagtaatggagctgccacaagcgaat
acgcgagctggtctctacgtatttctgaattcattacttgttgcacgaccactaactgat
gactttgttatcattagccacttacatacgcgttacaagctagaacctcagaacatggca
acagaactaatcacagctgcctttgacattctcgccaacgccatgtaccgcaatgaaccc
actcaaaccttgttctatctcaagtcttttttgatcaacaagattcctactcttctgacg
cagatttccggctcgatatttccaatgacagttgagatgtgtattacccaggcgctgagc
catgtggatccaaacgctttcccgtctttctcgcaaggcttcgacgatatcatgggaagc
aacaactctctttcagatgtcaggcaggattatctcaatgcctgtgtgctccacggtctc
ctcccagcgggtactgtagagcgccttctaggggaggcacctatgcaaggaccacccgca
aagagatacgagaggaaggaattgttcaaccagtgcaaattaaatttcgataaagtcagc
gtatacatcgatgaactcgagaatcttgatggaaacgctggtgccattgttgcagctatt
gcagacttcatttcacatctttgcgatacacaaacgaccatgtatctaaaacagctttgc
tgtttgatcttcaagaaaccccaagcaatggatgtgatgctacagttcacctcgcctgcg
agcatactacgaccgttgtgtcaatttctcgaagactggcattatgatagcgatcaaggc
gaataccaacccgtatacgacgagtttggcgctatacttgttctcatcatggcttttgta
taccgctatgatctggtatgccatgacatcggcattgctcacgatacattcatcgcaaag
ctattgcagcatggacatcacagcatcccgccagatgagttgactgaagagcagggtgga
catcttggaagctggctcaaaggtctctacgactcggacaaggaaggcttgagtaatgaa
gtattcgcgtcatgtcggccgcaagacttttacttgatcgtaccaacccttttccatcag
acagtagcggcttgctccctaggcgttttgtcttttgaaaccgtcaaaggtggtttagaa
tacctgggtgaaacattcctcatgccgtcgctaatcggagggttgacctggatggcttcc
tatgccttgctacagacccacaacgacctagacgcaatcacacgcattttcaacgcgatt
ttactctctgcaccatcatccggagatgcacaagctatgcactccaccatcatagcaatg
gtgtcaagccgcctggagaagtgttttcgtacactacagcgacgagaaccgaatcgcaac
aacctcgactcctttttgcaggctatcaaagttcacacacactatgaacgcaccgtgttt
gccacaatgaaggagctggatcaatggacaaatgcacccaatagtacattgaatacttca
ctgcgacacactgtgcaacagctctcacaatgggcttcaacggcctcgatgcaaccaaat
ccgccaagctacacacaccgtcagctttacgcttcgctgaagatgttgggcgcggcccgg
acattacgggctattgtagacgagttgaagacgcaaactgacagtggtaacggagcagca
gcacttgatgttggggtatccattgtctgcgcgccaactgttgaggatagccccatctca
gtagactgggttggaagcacggtaccagcgcccacaccgcaacgaacacgtatgaaccta
cgagagatgctgaagcaggatttcgacaatgcagccagcctagtcgctaccgatcccttg
accgcagagacaatagtgcgtttacaccggcgcgtcgaagcacactttacatcgctggcg
gagagcggactccaagcacctccaatcaacataccaagcgtcaatatcacagatatgcag
tcgcaatccatttccgagcacctgaaccgcgccatggacgacgctgcagccgcgagtatg
gttgaggatatttccaacatggataacaaggctctccagcgcagcatggacgagctggcc
agcactgaggggctggacctgtcgggtatcggtatgggcaatggcgatgcaggaactggc
gatatgagcacggatctgggtaacttgccggacttggacctgggtgatatgggaggtatg
ggcatagatatggatatgaatatggacatgggtggaggcggaggaggtgatgatgactgg
ggacttgatttcgacaacatgtag
DBGET
integrated database retrieval system
