KEGG   Bipolaris sorokiniana: COCSADRAFT_108882
Entry
COCSADRAFT_108882 CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSADRAFT_108882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsc03019]
    COCSADRAFT_108882
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_108882
Messenger RNA biogenesis [BR:bsc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCSADRAFT_108882
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    COCSADRAFT_108882
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 EIF3I Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 eIF2A Pep3_Vps18 Beta-prop_IFT80_2nd Cadherin_4
Other DBs
NCBI-GeneID: 19130073
NCBI-ProteinID: XP_007696021
JGI: Cocsa1_108882
UniProt: M2RP54
LinkDB
Position
Unknown
AA seq 363 aa
MALFGQAAAPAATSSTTGDTSKDVEVPAGQVPSDSISDLQFSPTNDFLAVGSWDKKVYIY
EVNGNGAMGKWMFECQGHVLGVGWSKDGTRIAAGDSTGMLNIVDFRTAPASGTVPAQQAK
AHENAIKCVRWFQTGGKDYVATGSWDKTVKFWDLQGAEPVGTLQCQERVYSMDVKDQLLV
IATAERHIHMVNLTNPTTIYKTITSPLKWQTRVVSCFTDATGFAVGSIEGRCAIQYVEDK
DTSLNFSFKCHRQPDPNARETAKVFSVNAISFHPQHGTFSTAGSDGTFHFWDKDAKHRLK
GYPEVGGSIVATSFSKDGNIFAYAVSYDWSKGYGGNNQQYPIKIKLHPILGDECKPRPGS
KKR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcgcttttcggtcaagccgcggcgcctgctgctaccagctctacaacgggagacaca
agcaaagatgttgaagtgccagccggccaagtacccagcgacagcatatccgacctccag
ttctcgccaaccaacgacttcctcgcggtaggaagctgggacaagaaagtctacatctac
gaagtcaacggcaatggcgcaatgggaaagtggatgtttgagtgccagggtcatgttctg
ggtgtgggttggtcaaaggatggcacacgcatagcagccggcgactcaacaggtatgctc
aatattgttgacttccggactgccccggccagcggtactgtccccgcccagcaagccaag
gctcatgagaatgccatcaagtgcgtacgctggttccagactggcggcaaggactatgtt
gcgactggctcgtgggacaagacggtcaagttttgggatctacagggtgctgaacccgtc
ggcacgctgcaatgtcaggagcgcgtctacagcatggatgtcaaagatcaattgctcgtc
attgcgacagcagagcgccacatccacatggtcaacttgaccaaccccacgaccatttac
aagactatcaccagtccacttaagtggcagacaagagtggttagctgttttacagatgca
accggtttcgctgttggctccatcgagggccgatgcgccatccaatacgtcgaggacaag
gataccagtctcaacttctcttttaagtgccaccgccaacccgaccccaacgctcgcgaa
accgcaaaggtcttctctgtaaatgccatttccttccacccacaacatggcactttctct
actgccggctccgacggcaccttccacttctgggacaaggacgcaaagcaccgcctcaag
ggctaccctgaagtcggcggcagcatcgttgcgacgagcttcagcaaagacggaaacatt
ttcgcatatgcagtcagctacgactggagtaagggctacggaggcaacaaccagcagtac
cctatcaagatcaagcttcaccccattctcggggatgaatgcaaaccacgtccaggaagc
aagaagaggtaa

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